RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A CKA1P15790 372 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A INM1P38710 295 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A SEC27P41811 889 aaKnown RBP0.63□□□□□ -2.31
YMR172C-AYMR172C-A AIM23P47015 356 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A STE24P47154 453 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A NAS6P50086 228 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A YPL080CQ02826 108 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A PRP42Q03776 544 aaKnown RBP0.63□□□□□ -2.31
YMR172C-AYMR172C-A UTP15Q04305 513 aaKnown RBP0.63□□□□□ -2.31
YMR172C-AYMR172C-A CSI1Q04368 295 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A ARR1Q06596 294 aa0.63□□□□□ -2.31
YMR172C-AYMR172C-A YRF1-4O13559 1382 aa0.62□□□□□ -2.31
YMR172C-AYMR172C-A BGL2P15703 313 aaKnown RBP0.62□□□□□ -2.31
YMR172C-AYMR172C-A HSP104P31539 908 aaKnown RBP0.62□□□□□ -2.31
YMR172C-AYMR172C-A IMP2'P32351 346 aa0.62□□□□□ -2.31
YMR172C-AYMR172C-A ERO1Q03103 563 aa0.62□□□□□ -2.31
YMR172C-AYMR172C-A ACL4Q03771 387 aa0.62□□□□□ -2.31
YMR172C-AYMR172C-A ARX1Q03862 593 aaKnown RBP0.62□□□□□ -2.31
YMR172C-AYMR172C-A MMT2Q08970 484 aa0.62□□□□□ -2.31
YMR172C-AYMR172C-A PRP46Q12417 451 aaPredicted RBP0.62□□□□□ -2.31
YMR172C-AYMR172C-A YOL159C-AQ3E769 90 aa0.62□□□□□ -2.31
YMR172C-AYMR172C-A ARF1P11076 181 aaKnown RBP0.61□□□□□ -2.31
YMR172C-AYMR172C-A MRP7P12687 371 aa0.61□□□□□ -2.31
YMR172C-AYMR172C-A MIR1P23641 311 aaKnown RBP0.61□□□□□ -2.31
YMR172C-AYMR172C-A TIP20P33891 701 aa0.61□□□□□ -2.31
YMR172C-AYMR172C-A MED6P38782 295 aa0.61□□□□□ -2.31
YMR172C-AYMR172C-A RRN9P53437 365 aa0.61□□□□□ -2.31
YMR172C-AYMR172C-A RPL23AP0CX41 137 aaKnown RBP0.6□□□□□ -2.31
YMR172C-AYMR172C-A RPL23BP0CX42 137 aaKnown RBP0.6□□□□□ -2.31
YMR172C-AYMR172C-A ASC1P38011 319 aaKnown RBP0.6□□□□□ -2.31
YMR172C-AYMR172C-A STN1P38960 494 aa0.6□□□□□ -2.31
YMR172C-AYMR172C-A TOS2P50078 622 aa0.6□□□□□ -2.31
YMR172C-AYMR172C-A PEX30Q06169 523 aa0.6□□□□□ -2.31
YMR172C-AYMR172C-A MMR1Q06324 491 aa0.6□□□□□ -2.31
YMR172C-AYMR172C-A OPI3P05375 206 aa0.59□□□□□ -2.31
YMR172C-AYMR172C-A ADH3P07246 375 aaKnown RBP0.59□□□□□ -2.31
YMR172C-AYMR172C-A RED1P14291 827 aa0.59□□□□□ -2.31
YMR172C-AYMR172C-A KRE1P17260 313 aa0.59□□□□□ -2.31
YMR172C-AYMR172C-A DAL81P21657 970 aa0.59□□□□□ -2.31
YMR172C-AYMR172C-A SSE1P32589 693 aaKnown RBP0.59□□□□□ -2.31
YMR172C-AYMR172C-A EFM1P38732 585 aa0.59□□□□□ -2.31
YMR172C-AYMR172C-A SMC2P38989 1170 aaKnown RBP0.59□□□□□ -2.31
YMR172C-AYMR172C-A NOC2P39744 710 aaKnown RBP0.59□□□□□ -2.31
YMR172C-AYMR172C-A ROG1P53118 685 aa0.59□□□□□ -2.31
YMR172C-AYMR172C-A PRP3Q03338 469 aaPredicted RBP0.59□□□□□ -2.31
YMR172C-AYMR172C-A CTA1P15202 515 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A RSA4P25382 515 aaKnown RBP0.58□□□□□ -2.32
YMR172C-AYMR172C-A RIM1P32445 135 aaKnown RBP0.58□□□□□ -2.32
YMR172C-AYMR172C-A IRC6P43615 237 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A HIT1P46973 164 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A ABM1P47146 123 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A RTS3P53289 263 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A RPT4P53549 437 aaKnown RBP0.58□□□□□ -2.32
YMR172C-AYMR172C-A MRPL19P53875 158 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A GTO3Q04806 366 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A ROY1Q04847 553 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A YDR222WQ04925 415 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A VPS54Q12071 889 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A AFI1Q99222 893 aa0.58□□□□□ -2.32
YMR172C-AYMR172C-A TDH2P00358 332 aaKnown RBP0.57□□□□□ -2.32
YMR172C-AYMR172C-A TDH3P00359 332 aaKnown RBP RIP-Chip data0.57□□□□□ -2.32not detected
YMR172C-AYMR172C-A RPS14AP06367 137 aaKnown RBP0.57□□□□□ -2.32
YMR172C-AYMR172C-A RPL12AP0CX53 165 aaKnown RBP0.57□□□□□ -2.32
YMR172C-AYMR172C-A RPL12BP0CX54 165 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A YCR051WP25631 222 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A ITR2P30606 609 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A PMT2P31382 759 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A BYE1P36106 594 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A SLM4P38247 162 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A RCK1P38622 512 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A RPS14BP39516 138 aaKnown RBP0.57□□□□□ -2.32
YMR172C-AYMR172C-A YIL054WP40524 105 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A ECO1P43605 281 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A TOM22P49334 152 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A YOR283WQ12040 230 aaKnown RBP0.57□□□□□ -2.32
YMR172C-AYMR172C-A AEP3Q12089 606 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A RNH203Q12338 110 aa0.57□□□□□ -2.32
YMR172C-AYMR172C-A ARO3P14843 370 aaKnown RBP0.56□□□□□ -2.32
YMR172C-AYMR172C-A INO2P26798 304 aa0.56□□□□□ -2.32
YMR172C-AYMR172C-A NRP1P32770 719 aaKnown RBP RIP-Chip data0.56□□□□□ -2.32not detected
YMR172C-AYMR172C-A ZTA1P38230 334 aaKnown RBP0.56□□□□□ -2.32
YMR172C-AYMR172C-A MED8P38304 223 aa0.56□□□□□ -2.32
YMR172C-AYMR172C-A TAE1P38340 232 aa0.56□□□□□ -2.32
YMR172C-AYMR172C-A YCH1P42937 148 aa0.56□□□□□ -2.32
YMR172C-AYMR172C-A NSE1Q07913 336 aa0.56□□□□□ -2.32
YMR172C-AYMR172C-A SGT2Q12118 346 aaKnown RBP0.56□□□□□ -2.32
YMR172C-AYMR172C-A MED1Q12321 566 aa0.56□□□□□ -2.32
YMR172C-AYMR172C-A MRX4Q12467 430 aa0.56□□□□□ -2.32
YMR172C-AYMR172C-A PHO91P27514 894 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A YKL071WP36086 256 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A YKR015CP36111 568 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A QDR3P38227 689 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A PCL7P40186 285 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A GPD2P41911 440 aaKnown RBP0.55□□□□□ -2.32
YMR172C-AYMR172C-A MOB2P43563 287 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A PMT5P52867 743 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A CAX4P53223 239 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A INP1Q03694 420 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A DXO1Q06349 442 aa0.55□□□□□ -2.32
YMR172C-AYMR172C-A FEX1Q08913 375 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms