RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W YFL012WP43580 148 aa1.99□□□□□ -2.09
PKR1YMR123W YGR111WP53265 400 aa1.99□□□□□ -2.09
PKR1YMR123W TRM112P53738 135 aaPredicted RBP1.99□□□□□ -2.09
PKR1YMR123W YPL107WQ02873 248 aa1.99□□□□□ -2.09
PKR1YMR123W GEA1P47102 1408 aaPredicted RBP1.99□□□□□ -2.09
PKR1YMR123W IML1P47170 1584 aa1.98□□□□□ -2.09
PKR1YMR123W HAP1P0CE41 1502 aa1.98□□□□□ -2.09
PKR1YMR123W TPI1P00942 248 aaKnown RBP1.98□□□□□ -2.09
PKR1YMR123W TPK3P05986 398 aa1.98□□□□□ -2.09
PKR1YMR123W RPL12AP0CX53 165 aaKnown RBP1.98□□□□□ -2.09
PKR1YMR123W RPL12BP0CX54 165 aa1.98□□□□□ -2.09
PKR1YMR123W CMK2P22517 447 aa1.98□□□□□ -2.09
PKR1YMR123W SLM5P25345 492 aaKnown RBP1.98□□□□□ -2.09
PKR1YMR123W TIR2P33890 251 aa1.98□□□□□ -2.09
PKR1YMR123W QDR3P38227 689 aa1.98□□□□□ -2.09
PKR1YMR123W PFF1P38244 976 aa1.98□□□□□ -2.09
PKR1YMR123W KEG1P43614 200 aa1.98□□□□□ -2.09
PKR1YMR123W ATP22P50273 684 aaPredicted RBP1.98□□□□□ -2.09
PKR1YMR123W PMT5P52867 743 aa1.98□□□□□ -2.09
PKR1YMR123W RPL21AQ02753 160 aaKnown RBP1.98□□□□□ -2.09
PKR1YMR123W URC2Q04411 772 aa1.98□□□□□ -2.09
PKR1YMR123W YHC1Q05900 231 aaKnown RBP1.98□□□□□ -2.09
PKR1YMR123W MCT1Q12283 360 aa1.98□□□□□ -2.09
PKR1YMR123W RPL21BQ12672 160 aaKnown RBP1.98□□□□□ -2.09
PKR1YMR123W MEX67Q99257 599 aaKnown RBP1.98□□□□□ -2.09
PKR1YMR123W OPI3P05375 206 aa1.97□□□□□ -2.09
PKR1YMR123W ARF1P11076 181 aaKnown RBP1.97□□□□□ -2.09
PKR1YMR123W PHO91P27514 894 aa1.97□□□□□ -2.09
PKR1YMR123W DBF4P32325 704 aa1.97□□□□□ -2.09
PKR1YMR123W NRP1P32770 719 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
PKR1YMR123W DOA1P36037 715 aa1.97□□□□□ -2.09
PKR1YMR123W SOL2P37262 315 aa1.97□□□□□ -2.09
PKR1YMR123W ECM8P38246 354 aa1.97□□□□□ -2.09
PKR1YMR123W PAC11P40960 533 aa1.97□□□□□ -2.09
PKR1YMR123W TRF5P48561 642 aaKnown RBP1.97□□□□□ -2.09
PKR1YMR123W REX2P54964 269 aaKnown RBP1.97□□□□□ -2.09
PKR1YMR123W ENT5Q03769 411 aaKnown RBP1.97□□□□□ -2.09
PKR1YMR123W NDL1Q06568 189 aa1.97□□□□□ -2.09
PKR1YMR123W ISA2Q12425 185 aa1.97□□□□□ -2.09
PKR1YMR123W PRM7Q12459 698 aa1.97□□□□□ -2.09
PKR1YMR123W VMR1P38735 1592 aa1.97□□□□□ -2.09
PKR1YMR123W YBT1P32386 1661 aa1.96□□□□□ -2.1
PKR1YMR123W RPS18AP0CX55 146 aaKnown RBP1.96□□□□□ -2.1
PKR1YMR123W RPS18BP0CX56 146 aaPredicted RBP1.96□□□□□ -2.1
PKR1YMR123W CHA1P25379 360 aaKnown RBP1.96□□□□□ -2.1
PKR1YMR123W YSC83P32792 385 aa1.96□□□□□ -2.1
PKR1YMR123W GEP4P38812 185 aa1.96□□□□□ -2.1
PKR1YMR123W PEX22P39718 180 aa1.96□□□□□ -2.1
PKR1YMR123W ABM1P47146 123 aa1.96□□□□□ -2.1
PKR1YMR123W SEH1P53011 349 aaKnown RBP1.96□□□□□ -2.1
PKR1YMR123W ROG1P53118 685 aa1.96□□□□□ -2.1
PKR1YMR123W RSC1P53236 928 aa1.96□□□□□ -2.1
PKR1YMR123W HST1P53685 503 aa1.96□□□□□ -2.1
PKR1YMR123W PRP38Q00723 242 aaPredicted RBP1.96□□□□□ -2.1
PKR1YMR123W MSC3Q05812 728 aa1.96□□□□□ -2.1
PKR1YMR123W ECM7Q06200 448 aa1.96□□□□□ -2.1
PKR1YMR123W ASA1Q06822 443 aa1.96□□□□□ -2.1
PKR1YMR123W NOP6Q07623 225 aaKnown RBP1.96□□□□□ -2.1
PKR1YMR123W DCI1Q08558 271 aa1.96□□□□□ -2.1
PKR1YMR123W SFM1Q12314 213 aa1.96□□□□□ -2.1
PKR1YMR123W HMS1Q12398 434 aa1.96□□□□□ -2.1
PKR1YMR123W BI3Q9ZZW7 517 aa1.96□□□□□ -2.1
PKR1YMR123W NUP188P52593 1655 aaKnown RBP1.96□□□□□ -2.1
PKR1YMR123W USO1P25386 1790 aa1.95□□□□□ -2.1
PKR1YMR123W PDE2P06776 526 aa1.95□□□□□ -2.1
PKR1YMR123W MAS2P11914 482 aa1.95□□□□□ -2.1
PKR1YMR123W PUT4P15380 627 aa1.95□□□□□ -2.1
PKR1YMR123W VMA8P32610 256 aaKnown RBP1.95□□□□□ -2.1
PKR1YMR123W YER184CP39961 794 aa1.95□□□□□ -2.1
PKR1YMR123W PFS2P42841 465 aaKnown RBP1.95□□□□□ -2.1
PKR1YMR123W BUD27P43573 796 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
PKR1YMR123W RTT102P53330 157 aa1.95□□□□□ -2.1
PKR1YMR123W VAC7P53950 1165 aa1.95□□□□□ -2.1
PKR1YMR123W YDR541CQ03049 344 aa1.95□□□□□ -2.1
PKR1YMR123W AAD15Q08361 143 aa1.95□□□□□ -2.1
PKR1YMR123W YPS3Q12303 508 aa1.95□□□□□ -2.1
PKR1YMR123W HIF1Q12373 385 aa1.95□□□□□ -2.1
PKR1YMR123W TY1B-NL2Q99337 1749 aaKnown RBP1.94□□□□□ -2.1
PKR1YMR123W SRB8P25648 1427 aa1.94□□□□□ -2.1
PKR1YMR123W RNA1P11745 407 aaKnown RBP1.94□□□□□ -2.1
PKR1YMR123W TPS2P31688 896 aaKnown RBP1.94□□□□□ -2.1
PKR1YMR123W TOA1P32773 286 aa1.94□□□□□ -2.1
PKR1YMR123W FMT1P32785 401 aa1.94□□□□□ -2.1
PKR1YMR123W WSS1P38838 269 aa1.94□□□□□ -2.1
PKR1YMR123W CIN2P46670 268 aa1.94□□□□□ -2.1
PKR1YMR123W YGR067CP53243 804 aa1.94□□□□□ -2.1
PKR1YMR123W YLR177WQ06251 628 aa1.94□□□□□ -2.1
PKR1YMR123W PDR5P33302 1511 aaKnown RBP1.94□□□□□ -2.1
PKR1YMR123W FAB1P34756 2278 aa1.94□□□□□ -2.1
PKR1YMR123W RPS19AP07280 144 aaKnown RBP1.93□□□□□ -2.1
PKR1YMR123W RPS19BP07281 144 aaPredicted RBP1.93□□□□□ -2.1
PKR1YMR123W ASP3-2P0CX77 362 aa1.93□□□□□ -2.1
PKR1YMR123W ASP3-3P0CX78 362 aa1.93□□□□□ -2.1
PKR1YMR123W ASP3-4P0CX79 362 aa1.93□□□□□ -2.1
PKR1YMR123W ASP3-1P0CZ17 362 aa1.93□□□□□ -2.1
PKR1YMR123W RRP7P25368 297 aaPredicted RBP1.93□□□□□ -2.1
PKR1YMR123W ANP1P32629 500 aa1.93□□□□□ -2.1
PKR1YMR123W CYM1P32898 989 aa1.93□□□□□ -2.1
PKR1YMR123W WSC4P38739 605 aa1.93□□□□□ -2.1
PKR1YMR123W SEC27P41811 889 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms