RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PML39	YML107C	YSW1	P38280	609 aa		3.19	□□□□□ -1.9
PML39	YML107C	WSC4	P38739	605 aa		3.19	□□□□□ -1.9
PML39	YML107C	SEC9	P40357	651 aa		3.19	□□□□□ -1.9
PML39	YML107C	MPS2	P53159	387 aa		3.19	□□□□□ -1.9
PML39	YML107C	KTR6	P54070	446 aa		3.19	□□□□□ -1.9
PML39	YML107C	SHS1	Q07657	551 aa		3.19	□□□□□ -1.9
PML39	YML107C	FOL3	Q12676	427 aa	Predicted RBP	3.19	□□□□□ -1.9
PML39	YML107C	TRM732	Q03496	1420 aa		3.19	□□□□□ -1.9
PML39	YML107C	TY2B-LR1	P0C2J3	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY2B-F	P0CX63	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY2B-GR2	P0CX64	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY2B-C	P25384	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY2B-DR2	Q03494	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY1B-DR1	Q03855	1755 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY2B-DR3	Q07791	1770 aa	Known RBP	3.18	□□□□□ -1.9
PML39	YML107C	TY2B-OR1	Q12113	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY2B-DR1	Q12472	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	TY2B-OR2	Q12501	1770 aa		3.18	□□□□□ -1.9
PML39	YML107C	SPO14	P36126	1683 aa		3.18	□□□□□ -1.9
PML39	YML107C	STE7	P06784	515 aa		3.18	□□□□□ -1.9
PML39	YML107C	SCH9	P11792	824 aa	Known RBP	3.18	□□□□□ -1.9
PML39	YML107C	PSO2	P30620	661 aa		3.18	□□□□□ -1.9
PML39	YML107C	MSK1	P32048	576 aa		3.18	□□□□□ -1.9
PML39	YML107C	SSE1	P32589	693 aa	Known RBP	3.18	□□□□□ -1.9
PML39	YML107C	BLI1	P35727	113 aa		3.18	□□□□□ -1.9
PML39	YML107C	LSM12	P38828	187 aa	Known RBP	3.18	□□□□□ -1.9
PML39	YML107C	LYS12	P40495	371 aa	Known RBP	3.18	□□□□□ -1.9
PML39	YML107C	IGD1	P43598	195 aa		3.18	□□□□□ -1.9
PML39	YML107C	ABM1	P47146	123 aa		3.18	□□□□□ -1.9
PML39	YML107C	MRPS16	Q02608	121 aa		3.18	□□□□□ -1.9
PML39	YML107C	YPL107W	Q02873	248 aa		3.18	□□□□□ -1.9
PML39	YML107C	YOR338W	Q99326	363 aa		3.18	□□□□□ -1.9
PML39	YML107C	ARO1	P08566	1588 aa	Known RBP	3.17	□□□□□ -1.9
PML39	YML107C	PHO84	P25297	587 aa	Known RBP	3.17	□□□□□ -1.9
PML39	YML107C	GIT1	P25346	518 aa		3.17	□□□□□ -1.9
PML39	YML107C	SOL2	P37262	315 aa		3.17	□□□□□ -1.9
PML39	YML107C	YHR182W	P38870	785 aa		3.17	□□□□□ -1.9
PML39	YML107C	VHS1	Q03785	461 aa		3.17	□□□□□ -1.9
PML39	YML107C	MSC3	Q05812	728 aa		3.17	□□□□□ -1.9
PML39	YML107C	MCH1	Q07376	486 aa		3.17	□□□□□ -1.9
PML39	YML107C	GLE1	Q12315	538 aa		3.17	□□□□□ -1.9
PML39	YML107C	SKS1	Q12505	502 aa		3.17	□□□□□ -1.9
PML39	YML107C	SCC2	Q04002	1493 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-H	O13535	1793 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-DR5	P0C2I2	1755 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-DR6	P0C2I3	1755 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-LR2	P0C2I5	1755 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	TY1B-PR2	P0C2J0	1756 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	TY1B-JR1	P47098	1755 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-ML2	Q03434	1755 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	TY1B-ER1	Q03612	1755 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-ML1	Q04711	1755 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	TY1B-GR2	Q12269	1755 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-OL	Q12273	1755 aa		3.16	□□□□□ -1.9
PML39	YML107C	TY1B-PL	Q12414	1755 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	CMK2	P22517	447 aa		3.16	□□□□□ -1.9
PML39	YML107C	FAA1	P30624	700 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	EFB1	P32471	206 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	SWI3	P32591	825 aa		3.16	□□□□□ -1.9
PML39	YML107C	YPS5	P53057	165 aa		3.16	□□□□□ -1.9
PML39	YML107C	YHC1	Q05900	231 aa	Known RBP	3.16	□□□□□ -1.9
PML39	YML107C	GAT3	Q07928	141 aa		3.16	□□□□□ -1.9
PML39	YML107C	DNL4	Q08387	944 aa	Predicted RBP	3.16	□□□□□ -1.9
PML39	YML107C	HEM4	P06174	275 aa		3.15	□□□□□ -1.91
PML39	YML107C	DAL5	P15365	543 aa		3.15	□□□□□ -1.91
PML39	YML107C	UBA1	P22515	1024 aa	Known RBP	3.15	□□□□□ -1.91
PML39	YML107C	DBR1	P24309	405 aa	Known RBP	3.15	□□□□□ -1.91
PML39	YML107C	DPH2	P32461	534 aa		3.15	□□□□□ -1.91
PML39	YML107C	BMT2	P38278	337 aa		3.15	□□□□□ -1.91
PML39	YML107C	CIN2	P46670	268 aa		3.15	□□□□□ -1.91
PML39	YML107C	YGL262W	P53054	175 aa		3.15	□□□□□ -1.91
PML39	YML107C	RET3	P53600	189 aa		3.15	□□□□□ -1.91
PML39	YML107C	ENT5	Q03769	411 aa	Known RBP	3.15	□□□□□ -1.91
PML39	YML107C	FSH2	Q05015	223 aa		3.15	□□□□□ -1.91
PML39	YML107C	YLH47	Q06493	454 aa		3.15	□□□□□ -1.91
PML39	YML107C	YDL109C	Q12103	647 aa		3.15	□□□□□ -1.91
PML39	YML107C	HIF1	Q12373	385 aa		3.15	□□□□□ -1.91
PML39	YML107C	FSH3	Q99369	266 aa		3.15	□□□□□ -1.91
PML39	YML107C	SKI3	P17883	1432 aa	Known RBP	3.15	□□□□□ -1.91
PML39	YML107C	LDS1	P31379	325 aa		3.14	□□□□□ -1.91
PML39	YML107C	LAS1	P36146	502 aa	Predicted RBP	3.14	□□□□□ -1.91
PML39	YML107C	YJR030C	P47101	745 aa		3.14	□□□□□ -1.91
PML39	YML107C	YNR068C	P53754	272 aa		3.14	□□□□□ -1.91
PML39	YML107C	YMR310C	Q04867	317 aa	Predicted RBP	3.14	□□□□□ -1.91
PML39	YML107C	XRN1	P22147	1528 aa	Known RBP	3.14	□□□□□ -1.91
PML39	YML107C	MAS1	P10507	462 aa		3.13	□□□□□ -1.91
PML39	YML107C	MAS2	P11914	482 aa		3.13	□□□□□ -1.91
PML39	YML107C	DAP2	P18962	818 aa		3.13	□□□□□ -1.91
PML39	YML107C	COS9	P36034	407 aa		3.13	□□□□□ -1.91
PML39	YML107C	MRPS9	P38120	278 aa		3.13	□□□□□ -1.91
PML39	YML107C	APE4	P38821	490 aa		3.13	□□□□□ -1.91
PML39	YML107C	PEX22	P39718	180 aa		3.13	□□□□□ -1.91
PML39	YML107C	CTK3	P46963	296 aa	Predicted RBP	3.13	□□□□□ -1.91
PML39	YML107C	RPA34	P47006	233 aa	Predicted RBP	3.13	□□□□□ -1.91
PML39	YML107C	PRP38	Q00723	242 aa	Predicted RBP	3.13	□□□□□ -1.91
PML39	YML107C	TPS1	Q00764	495 aa	Known RBP	3.13	□□□□□ -1.91
PML39	YML107C	AIM33	Q04516	312 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms