RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YMR102CQ03177 834 aa4.35□□□□□ -1.71
VPS36YLR417W CAB5Q03941 241 aa4.35□□□□□ -1.71
VPS36YLR417W SMC5Q08204 1093 aa4.35□□□□□ -1.71
VPS36YLR417W GDB1Q06625 1536 aa4.35□□□□□ -1.71
VPS36YLR417W FAR1P21268 830 aa4.35□□□□□ -1.71
VPS36YLR417W DPH5P32469 300 aaPredicted RBP4.35□□□□□ -1.71
VPS36YLR417W ZUO1P32527 433 aaKnown RBP4.35□□□□□ -1.71
VPS36YLR417W FMP46P36141 133 aaKnown RBP4.35□□□□□ -1.71
VPS36YLR417W PEX32P38292 413 aa4.35□□□□□ -1.71
VPS36YLR417W YGL260WP53056 76 aa4.35□□□□□ -1.71
VPS36YLR417W NAT4Q04751 285 aa4.35□□□□□ -1.71
VPS36YLR417W TSR1Q07381 788 aaKnown RBP4.35□□□□□ -1.71
VPS36YLR417W GAT3Q07928 141 aa4.35□□□□□ -1.71
VPS36YLR417W APC2Q12440 853 aa4.35□□□□□ -1.71
VPS36YLR417W YCR024C-BQ3E7Z8 88 aa4.35□□□□□ -1.71
VPS36YLR417W OM45P16547 393 aa4.34□□□□□ -1.71
VPS36YLR417W ARF2P19146 181 aaKnown RBP4.34□□□□□ -1.71
VPS36YLR417W TCD1P38756 429 aa4.34□□□□□ -1.71
VPS36YLR417W MAM33P40513 266 aa4.34□□□□□ -1.71
VPS36YLR417W CWC25P53854 179 aaKnown RBP4.34□□□□□ -1.71
VPS36YLR417W MTQ1P53944 314 aa4.34□□□□□ -1.71
VPS36YLR417W EAF3Q12432 401 aa4.34□□□□□ -1.71
VPS36YLR417W NUP157P40064 1391 aaKnown RBP4.34□□□□□ -1.71
VPS36YLR417W ESC1Q03661 1658 aaKnown RBP4.34□□□□□ -1.72
VPS36YLR417W MSS116P15424 664 aaKnown RBP4.33□□□□□ -1.72
VPS36YLR417W CIN8P27895 1000 aa4.33□□□□□ -1.72
VPS36YLR417W PPQ1P32945 549 aa4.33□□□□□ -1.72
VPS36YLR417W YHR131CP38835 850 aa4.33□□□□□ -1.72
VPS36YLR417W YHR182WP38870 785 aa4.33□□□□□ -1.72
VPS36YLR417W BTT1P40314 149 aaPredicted RBP4.33□□□□□ -1.72
VPS36YLR417W LST7P53237 242 aa4.33□□□□□ -1.72
VPS36YLR417W PBA1Q05778 276 aa4.33□□□□□ -1.72
VPS36YLR417W MRPL35Q06678 367 aa4.33□□□□□ -1.72
VPS36YLR417W YGK3Q12222 375 aaPredicted RBP4.33□□□□□ -1.72
VPS36YLR417W ERV2Q12284 196 aa4.33□□□□□ -1.72
VPS36YLR417W RRP36Q12481 300 aaPredicted RBP4.33□□□□□ -1.72
VPS36YLR417W RPL18AP0CX49 186 aaKnown RBP4.32□□□□□ -1.72
VPS36YLR417W RPL18BP0CX50 186 aaKnown RBP4.32□□□□□ -1.72
VPS36YLR417W PUT4P15380 627 aa4.32□□□□□ -1.72
VPS36YLR417W YPS1P32329 569 aa4.32□□□□□ -1.72
VPS36YLR417W RBG1P39729 369 aa4.32□□□□□ -1.72
VPS36YLR417W LCB3P47013 409 aa4.32□□□□□ -1.72
VPS36YLR417W AIM24P47127 394 aa4.32□□□□□ -1.72
VPS36YLR417W HTZ1Q12692 134 aaKnown RBP4.32□□□□□ -1.72
VPS36YLR417W VTH1P40438 1549 aa4.32□□□□□ -1.72
VPS36YLR417W VTH2P40890 1549 aa4.32□□□□□ -1.72
VPS36YLR417W HHF1P02309 103 aaKnown RBP4.32□□□□□ -1.72
VPS36YLR417W GAL7P08431 366 aa4.32□□□□□ -1.72
VPS36YLR417W RIB7P33312 244 aa4.32□□□□□ -1.72
VPS36YLR417W IST2P38250 946 aa4.32□□□□□ -1.72
VPS36YLR417W KEG1P43614 200 aa4.32□□□□□ -1.72
VPS36YLR417W RIB4P50861 169 aaPredicted RBP4.32□□□□□ -1.72
VPS36YLR417W DBP6P53734 629 aaKnown RBP4.32□□□□□ -1.72
VPS36YLR417W TDA1Q03533 586 aa4.32□□□□□ -1.72
VPS36YLR417W YLH47Q06493 454 aa4.32□□□□□ -1.72
VPS36YLR417W YLR413WQ06689 675 aa4.32□□□□□ -1.72
VPS36YLR417W PCL9Q12477 304 aa4.32□□□□□ -1.72
VPS36YLR417W YMR230W-AQ3E7B5 62 aa4.32□□□□□ -1.72
VPS36YLR417W DET1Q99288 334 aaKnown RBP4.32□□□□□ -1.72
VPS36YLR417W IQG1Q12280 1495 aa4.31□□□□□ -1.72
VPS36YLR417W SAR1P20606 190 aaKnown RBP4.31□□□□□ -1.72
VPS36YLR417W UTR1P21373 530 aa4.31□□□□□ -1.72
VPS36YLR417W POP5P28005 173 aa4.31□□□□□ -1.72
VPS36YLR417W YBL059WP34224 193 aa4.31□□□□□ -1.72
VPS36YLR417W ATG7P38862 630 aa4.31□□□□□ -1.72
VPS36YLR417W TRF5P48561 642 aaKnown RBP4.31□□□□□ -1.72
VPS36YLR417W VOA1P53262 265 aa4.31□□□□□ -1.72
VPS36YLR417W YDL114WQ07530 308 aa4.31□□□□□ -1.72
VPS36YLR417W YOR387CQ08910 206 aa4.31□□□□□ -1.72
VPS36YLR417W DCP1Q12517 231 aaPredicted RBP4.31□□□□□ -1.72
VPS36YLR417W SPT15P13393 240 aaKnown RBP4.3□□□□□ -1.72
VPS36YLR417W VMA5P31412 392 aaKnown RBP4.3□□□□□ -1.72
VPS36YLR417W MYO3P36006 1272 aa4.3□□□□□ -1.72
VPS36YLR417W PTH1P38876 190 aaKnown RBP4.3□□□□□ -1.72
VPS36YLR417W KRE9P39005 276 aa4.3□□□□□ -1.72
VPS36YLR417W HAC1P41546 238 aa4.3□□□□□ -1.72
VPS36YLR417W AIP1P46680 615 aaKnown RBP4.3□□□□□ -1.72
VPS36YLR417W SCS3P53012 380 aa4.3□□□□□ -1.72
VPS36YLR417W ELP3Q02908 557 aaKnown RBP4.3□□□□□ -1.72
VPS36YLR417W ECM18Q04623 453 aa4.3□□□□□ -1.72
VPS36YLR417W RRG8Q06109 277 aa4.3□□□□□ -1.72
VPS36YLR417W VAC14Q06708 880 aa4.3□□□□□ -1.72
VPS36YLR417W PAA1Q12447 191 aaKnown RBP4.3□□□□□ -1.72
VPS36YLR417W RAD1P06777 1100 aa4.29□□□□□ -1.72
VPS36YLR417W ARO2P28777 376 aaKnown RBP4.29□□□□□ -1.72
VPS36YLR417W PAD1P33751 242 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
VPS36YLR417W ECM8P38246 354 aa4.29□□□□□ -1.72
VPS36YLR417W NDT80P38830 627 aa4.29□□□□□ -1.72
VPS36YLR417W UTP25P40498 721 aaKnown RBP4.29□□□□□ -1.72
VPS36YLR417W CDC40P40968 455 aaPredicted RBP4.29□□□□□ -1.72
VPS36YLR417W LOH1P47055 219 aa4.29□□□□□ -1.72
VPS36YLR417W NAS6P50086 228 aa4.29□□□□□ -1.72
VPS36YLR417W SPO19Q03029 223 aa4.29□□□□□ -1.72
VPS36YLR417W RTN1Q04947 295 aaKnown RBP4.29□□□□□ -1.72
VPS36YLR417W YPR091CQ06833 770 aa4.29□□□□□ -1.72
VPS36YLR417W FCY22Q12119 530 aa4.29□□□□□ -1.72
VPS36YLR417W TRM3Q07527 1436 aa4.29□□□□□ -1.72
VPS36YLR417W ARO1P08566 1588 aaKnown RBP4.29□□□□□ -1.72
VPS36YLR417W MDS3P53094 1487 aa4.29□□□□□ -1.72
VPS36YLR417W RPS8AP0CX39 200 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 122.8 ms