RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C ADD37Q03233 198 aa1.74□□□□□ -2.13
SGD1YLR336C YMR310CQ04867 317 aaPredicted RBP1.74□□□□□ -2.13
SGD1YLR336C YOL075CQ08234 1294 aa1.74□□□□□ -2.13
SGD1YLR336C RPS18AP0CX55 146 aaKnown RBP1.73□□□□□ -2.13
SGD1YLR336C RPS18BP0CX56 146 aaPredicted RBP1.73□□□□□ -2.13
SGD1YLR336C MXR2P25566 168 aa1.73□□□□□ -2.13
SGD1YLR336C CDC50P25656 391 aa1.73□□□□□ -2.13
SGD1YLR336C EFB1P32471 206 aaKnown RBP1.73□□□□□ -2.13
SGD1YLR336C TRF5P48561 642 aaKnown RBP1.73□□□□□ -2.13
SGD1YLR336C PRM1P53835 661 aa1.73□□□□□ -2.13
SGD1YLR336C HAL1Q01766 294 aa1.73□□□□□ -2.13
SGD1YLR336C ARR1Q06596 294 aa1.73□□□□□ -2.13
SGD1YLR336C PRB1P09232 635 aa1.73□□□□□ -2.13
SGD1YLR336C UTR1P21373 530 aa1.73□□□□□ -2.13
SGD1YLR336C TRX1P22217 103 aaKnown RBP1.73□□□□□ -2.13
SGD1YLR336C HMX1P32339 317 aa1.73□□□□□ -2.13
SGD1YLR336C MRPS5P33759 307 aa1.73□□□□□ -2.13
SGD1YLR336C YHC3P47040 408 aa1.73□□□□□ -2.13
SGD1YLR336C LST7P53237 242 aa1.73□□□□□ -2.13
SGD1YLR336C YOR376WQ08900 122 aa1.73□□□□□ -2.13
SGD1YLR336C GLE1Q12315 538 aa1.73□□□□□ -2.13
SGD1YLR336C RPL16AP26784 199 aaKnown RBP1.72□□□□□ -2.13
SGD1YLR336C PMT2P31382 759 aa1.72□□□□□ -2.13
SGD1YLR336C OM14P38325 134 aa1.72□□□□□ -2.13
SGD1YLR336C YGL039WP53183 348 aaKnown RBP1.72□□□□□ -2.13
SGD1YLR336C NAT4Q04751 285 aa1.72□□□□□ -2.13
SGD1YLR336C MSC3Q05812 728 aa1.72□□□□□ -2.13
SGD1YLR336C SLM3Q12093 417 aa1.72□□□□□ -2.13
SGD1YLR336C HEM4P06174 275 aa1.72□□□□□ -2.13
SGD1YLR336C RPS14AP06367 137 aaKnown RBP1.72□□□□□ -2.13
SGD1YLR336C RAD1P06777 1100 aa1.72□□□□□ -2.13
SGD1YLR336C RPL23AP0CX41 137 aaKnown RBP1.72□□□□□ -2.13
SGD1YLR336C RPL23BP0CX42 137 aaKnown RBP1.72□□□□□ -2.13
SGD1YLR336C KRR1P25586 316 aaPredicted RBP1.72□□□□□ -2.13
SGD1YLR336C IST2P38250 946 aa1.72□□□□□ -2.13
SGD1YLR336C ALP1P38971 573 aa1.72□□□□□ -2.13
SGD1YLR336C RPS14BP39516 138 aaKnown RBP1.72□□□□□ -2.13
SGD1YLR336C YCH1P42937 148 aa1.72□□□□□ -2.13
SGD1YLR336C YJR030CP47101 745 aa1.72□□□□□ -2.13
SGD1YLR336C SEH1P53011 349 aaKnown RBP1.72□□□□□ -2.13
SGD1YLR336C VAC7P53950 1165 aa1.72□□□□□ -2.13
SGD1YLR336C YDL109CQ12103 647 aa1.72□□□□□ -2.13
SGD1YLR336C SPO24Q3E752 67 aa1.72□□□□□ -2.13
SGD1YLR336C VMA2P16140 517 aaKnown RBP1.71□□□□□ -2.14
SGD1YLR336C GIT1P25346 518 aa1.71□□□□□ -2.14
SGD1YLR336C MKK1P32490 508 aa1.71□□□□□ -2.14
SGD1YLR336C LIN1P38852 340 aaPredicted RBP1.71□□□□□ -2.14
SGD1YLR336C DFG10P40526 253 aa1.71□□□□□ -2.14
SGD1YLR336C HST1P53685 503 aa1.71□□□□□ -2.14
SGD1YLR336C PRO2P54885 456 aaKnown RBP1.71□□□□□ -2.14
SGD1YLR336C PRP38Q00723 242 aaPredicted RBP1.71□□□□□ -2.14
SGD1YLR336C SPH1Q06160 661 aa1.71□□□□□ -2.14
SGD1YLR336C APC5Q08683 685 aa1.71□□□□□ -2.14
SGD1YLR336C SOD1P00445 154 aaKnown RBP1.71□□□□□ -2.14
SGD1YLR336C HSP26P15992 214 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SGD1YLR336C ZRC1P20107 442 aa1.71□□□□□ -2.14
SGD1YLR336C CMK2P22517 447 aa1.71□□□□□ -2.14
SGD1YLR336C IES6P32617 166 aa1.71□□□□□ -2.14
SGD1YLR336C IML3P38265 245 aa1.71□□□□□ -2.14
SGD1YLR336C YPT35P38815 214 aaKnown RBP1.71□□□□□ -2.14
SGD1YLR336C YHR182WP38870 785 aa1.71□□□□□ -2.14
SGD1YLR336C ALD5P40047 520 aaKnown RBP1.71□□□□□ -2.14
SGD1YLR336C CSM3Q04659 317 aa1.71□□□□□ -2.14
SGD1YLR336C ATP16Q12165 160 aa1.71□□□□□ -2.14
SGD1YLR336C COX4P04037 155 aa1.7□□□□□ -2.14
SGD1YLR336C CIN8P27895 1000 aa1.7□□□□□ -2.14
SGD1YLR336C LSM12P38828 187 aaKnown RBP1.7□□□□□ -2.14
SGD1YLR336C POP2P39008 433 aa1.7□□□□□ -2.14
SGD1YLR336C PRP39P39682 629 aaKnown RBP1.7□□□□□ -2.14
SGD1YLR336C ENT5Q03769 411 aaKnown RBP1.7□□□□□ -2.14
SGD1YLR336C RRB1Q04225 511 aaKnown RBP1.7□□□□□ -2.14
SGD1YLR336C STE23Q06010 1027 aa1.7□□□□□ -2.14
SGD1YLR336C YLR177WQ06251 628 aa1.7□□□□□ -2.14
SGD1YLR336C REX3Q12090 404 aa1.7□□□□□ -2.14
SGD1YLR336C FRE8Q12209 686 aa1.7□□□□□ -2.14
SGD1YLR336C SFM1Q12314 213 aa1.7□□□□□ -2.14
SGD1YLR336C SAL1D6W196 494 aa1.7□□□□□ -2.14
SGD1YLR336C YLL053CP0CD98 152 aa1.7□□□□□ -2.14
SGD1YLR336C ARF2P19146 181 aaKnown RBP1.7□□□□□ -2.14
SGD1YLR336C RCK2P38623 610 aa1.7□□□□□ -2.14
SGD1YLR336C RBG1P39729 369 aa1.7□□□□□ -2.14
SGD1YLR336C IGD1P43598 195 aa1.7□□□□□ -2.14
SGD1YLR336C NAS6P50086 228 aa1.7□□□□□ -2.14
SGD1YLR336C MRPS16Q02608 121 aa1.7□□□□□ -2.14
SGD1YLR336C ABZ2Q03266 374 aa1.7□□□□□ -2.14
SGD1YLR336C TRM82Q03774 444 aa1.7□□□□□ -2.14
SGD1YLR336C DNL4Q08387 944 aaPredicted RBP1.7□□□□□ -2.14
SGD1YLR336C MIR1P23641 311 aaKnown RBP1.69□□□□□ -2.14
SGD1YLR336C YKR015CP36111 568 aa1.69□□□□□ -2.14
SGD1YLR336C WSC4P38739 605 aa1.69□□□□□ -2.14
SGD1YLR336C AIP1P46680 615 aaKnown RBP1.69□□□□□ -2.14
SGD1YLR336C YGR018CP53211 109 aa1.69□□□□□ -2.14
SGD1YLR336C SUR7P54003 302 aa1.69□□□□□ -2.14
SGD1YLR336C FSH2Q05015 223 aa1.69□□□□□ -2.14
SGD1YLR336C UBA3Q99344 299 aa1.69□□□□□ -2.14
SGD1YLR336C UNG1P12887 359 aa1.69□□□□□ -2.14
SGD1YLR336C DEP1P31385 405 aa1.69□□□□□ -2.14
SGD1YLR336C TOA1P32773 286 aa1.69□□□□□ -2.14
SGD1YLR336C MYO3P36006 1272 aa1.69□□□□□ -2.14
SGD1YLR336C PEX32P38292 413 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms