RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.81	□□□□□ -2.12	not detected
RIC1	YLR039C	KAR9	P32526	644 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	TIR2	P33890	251 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	YHR122W	P38829	231 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	LYS12	P40495	371 aa	Known RBP	1.81	□□□□□ -2.12
RIC1	YLR039C	MEP2	P41948	499 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	MRM2	P53123	320 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	ELP3	Q02908	557 aa	Known RBP	1.81	□□□□□ -2.12
RIC1	YLR039C	MDM36	Q06820	579 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	YOR387C	Q08910	206 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	TMS1	Q12116	473 aa		1.81	□□□□□ -2.12
RIC1	YLR039C	GAL3	P13045	520 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	FAR1	P21268	830 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	NAM9	P27929	486 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	YHR131C	P38835	850 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	PBA1	Q05778	276 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	CLN3	P13365	580 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	UTR1	P21373	530 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	MXR2	P25566	168 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	VAM7	P32912	316 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	CCT4	P39078	528 aa	Known RBP	1.8	□□□□□ -2.12
RIC1	YLR039C	BOR1	P53838	576 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	CUR1	Q06469	252 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	YLH47	Q06493	454 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	HIF1	Q12373	385 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	SRB8	P25648	1427 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	DBP3	P20447	523 aa	Known RBP	1.8	□□□□□ -2.12
RIC1	YLR039C	CSE2	P33308	149 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	NDT80	P38830	627 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	HEM14	P40012	539 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	PCL7	P40186	285 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	YHC3	P47040	408 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	NAT4	Q04751	285 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	CEX1	Q12453	761 aa		1.8	□□□□□ -2.12
RIC1	YLR039C	NUP192	P47054	1683 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	HMX1	P32339	317 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	PPQ1	P32945	549 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	SPT10	P35208	640 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	YBL028C	P38202	106 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	PRP39	P39682	629 aa	Known RBP	1.79	□□□□□ -2.12
RIC1	YLR039C	SNM1	P40993	198 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	CWC25	P53854	179 aa	Known RBP	1.79	□□□□□ -2.12
RIC1	YLR039C	RRB1	Q04225	511 aa	Known RBP	1.79	□□□□□ -2.12
RIC1	YLR039C	YTH1	Q06102	208 aa	Predicted RBP	1.79	□□□□□ -2.12
RIC1	YLR039C	GLE1	Q12315	538 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	RAD1	P06777	1100 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	MAS2	P11914	482 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	CHA1	P25379	360 aa	Known RBP	1.79	□□□□□ -2.12
RIC1	YLR039C	CIN8	P27895	1000 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	MNS1	P32906	549 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	MRPS5	P33759	307 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	COX14	P39103	70 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	YIL029C	P40538	142 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	SEC27	P41811	889 aa	Known RBP	1.79	□□□□□ -2.12
RIC1	YLR039C	MGR3	Q04472	501 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	RTT103	Q05543	409 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	YSP2	Q06681	1438 aa		1.79	□□□□□ -2.12
RIC1	YLR039C	PAN6	P40459	309 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	YCH1	P42937	148 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	YGL114W	P53134	725 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	VTI1	Q04338	217 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	YMR111C	Q04461	462 aa	Predicted RBP	1.78	□□□□□ -2.12
RIC1	YLR039C	MSC3	Q05812	728 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	MFG1	Q07684	458 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	YOL075C	Q08234	1294 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	CBP2	P03874	630 aa	Predicted RBP	1.78	□□□□□ -2.12
RIC1	YLR039C	IML3	P38265	245 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	PTH1	P38876	190 aa	Known RBP	1.78	□□□□□ -2.12
RIC1	YLR039C	SSO2	P39926	295 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	EGT2	P42835	1041 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	YFR018C	P43599	363 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	BNS1	P50084	137 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	RIB4	P50861	169 aa	Predicted RBP	1.78	□□□□□ -2.12
RIC1	YLR039C	LST7	P53237	242 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	YNL146W	P53906	100 aa		1.78	□□□□□ -2.12
RIC1	YLR039C	ERV25	P54837	211 aa	Known RBP	1.78	□□□□□ -2.12
RIC1	YLR039C	ADH2	P00331	348 aa	Known RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	YLL053C	P0CD98	152 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	YPS1	P32329	569 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	YBL059W	P34224	193 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	PTI1	P39927	425 aa	Predicted RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	AIM24	P47127	394 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	TRM112	P53738	135 aa	Predicted RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	YMR102C	Q03177	834 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	CAB5	Q03941	241 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	YHC1	Q05900	231 aa	Known RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	SHS1	Q07657	551 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	TLG2	Q08144	397 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	YGK3	Q12222	375 aa	Predicted RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	CDC37	P06101	506 aa	Known RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	RPS14A	P06367	137 aa	Known RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	PHO2	P07269	559 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	POP5	P28005	173 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	BUD2	P33314	1104 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	SWD3	P38123	315 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	ECM8	P38246	354 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	IST2	P38250	946 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	SWC5	P38326	303 aa		1.77	□□□□□ -2.13
RIC1	YLR039C	RPS14B	P39516	138 aa	Known RBP	1.77	□□□□□ -2.13
RIC1	YLR039C	SEC9	P40357	651 aa		1.77	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms