RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE1	YLR007W	SEC63	P14906	663 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	DAL82	P21705	255 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	PUT3	P25502	979 aa	Predicted RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	FUN19	P28003	413 aa	Predicted RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	VMA5	P31412	392 aa	Known RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	COS9	P36034	407 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	HIS2	P38635	335 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	MTW1	P39731	289 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	LYS12	P40495	371 aa	Known RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	YPS6	P40583	537 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	ABM1	P47146	123 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	CUS2	P53830	285 aa	Predicted RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
NSE1	YLR007W	SMP3	Q04174	516 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	GIM5	Q04493	163 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	ADH6	Q04894	360 aa	Known RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	FUS2	Q05670	677 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	GRS2	Q06817	618 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	CMS1	Q07897	291 aa	Known RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	SMC5	Q08204	1093 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	REX4	Q08237	289 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	YLL056C	Q12177	298 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	SIA1	Q12212	622 aa		4.05	□□□□□ -1.76
NSE1	YLR007W	AIM45	Q12480	344 aa	Known RBP	4.05	□□□□□ -1.76
NSE1	YLR007W	COX2	P00410	251 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	MATALPHA2	P0CY08	210 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	HMLALPHA2	P0CY09	210 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	APA2	P22108	325 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	APE2	P32454	952 aa	Known RBP	4.04	□□□□□ -1.76
NSE1	YLR007W	GCG1	P32656	232 aa	Known RBP	4.04	□□□□□ -1.76
NSE1	YLR007W	MNS1	P32906	549 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	GDH2	P33327	1092 aa	Known RBP	4.04	□□□□□ -1.76
NSE1	YLR007W	DOA1	P36037	715 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	MRPL10	P36520	322 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	LDB7	P38210	180 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	STP2	P38704	541 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	EGD2	P38879	174 aa	Known RBP	4.04	□□□□□ -1.76
NSE1	YLR007W	MMF1	P40185	145 aa	Known RBP	4.04	□□□□□ -1.76
NSE1	YLR007W	YMR134W	P40207	237 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	BTT1	P40314	149 aa	Predicted RBP	4.04	□□□□□ -1.76
NSE1	YLR007W	YMR209C	Q03648	457 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	NUP53	Q03790	475 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	YDR387C	Q04162	555 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	VIK1	Q12045	647 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	RNH203	Q12338	110 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	ERP3	Q12403	225 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	AI5_BETA	Q9ZZX0	354 aa		4.04	□□□□□ -1.76
NSE1	YLR007W	RHO1	P06780	209 aa	Known RBP	4.03	□□□□□ -1.76
NSE1	YLR007W	RPL12A	P0CX53	165 aa	Known RBP	4.03	□□□□□ -1.76
NSE1	YLR007W	RPL12B	P0CX54	165 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	ARF1	P11076	181 aa	Known RBP	4.03	□□□□□ -1.76
NSE1	YLR007W	FRS2	P15625	503 aa	Known RBP	4.03	□□□□□ -1.76
NSE1	YLR007W	CBF1	P17106	351 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	STE18	P18852	110 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	CKI1	P20485	582 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	RRT12	P25381	491 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	PTR2	P32901	601 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	SIP2	P34164	415 aa	Known RBP	4.03	□□□□□ -1.76
NSE1	YLR007W	MYO3	P36006	1272 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	VPS51	P36116	164 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	BIG1	P38813	335 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	TDA11	P38854	504 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	PFS1	P38872	237 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	SUR2	P38992	349 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	CCT2	P39076	527 aa	Known RBP	4.03	□□□□□ -1.76
NSE1	YLR007W	FHL1	P39521	936 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	YAR1	P46683	200 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	GLG2	P47011	380 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	COX16	P47081	118 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	RTC4	P53850	401 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	RPM2	Q02773	1202 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	MMT1	Q03218	510 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	RVB1	Q03940	463 aa	Known RBP	4.03	□□□□□ -1.76
NSE1	YLR007W	IVY1	Q04934	453 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	GLO2	Q05584	274 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	BNA5	Q05979	453 aa		4.03	□□□□□ -1.76
NSE1	YLR007W	YAK1	P14680	807 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	HPR1	P17629	752 aa	Known RBP	4.02	□□□□□ -1.77
NSE1	YLR007W	MET16	P18408	261 aa	Predicted RBP	4.02	□□□□□ -1.77
NSE1	YLR007W	POP5	P28005	173 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	ATP7	P30902	174 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	TRS65	P32893	560 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	SKN1	P33336	771 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	PRS4	P38063	326 aa	Predicted RBP	4.02	□□□□□ -1.77
NSE1	YLR007W	SMF2	P38778	549 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	SEC72	P39742	193 aa	Known RBP	4.02	□□□□□ -1.77
NSE1	YLR007W	SSN8	P47821	323 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	ALG11	P53954	548 aa	Known RBP	4.02	□□□□□ -1.77
NSE1	YLR007W	ARK1	P53974	638 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	UBX2	Q04228	584 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	BER1	Q06688	274 aa	Known RBP	4.02	□□□□□ -1.77
NSE1	YLR007W	LDS2	Q08218	356 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	NDD1	Q08887	554 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	YPQ1	Q12010	308 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	SRO7	Q12038	1033 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	ARP6	Q12509	438 aa		4.02	□□□□□ -1.77
NSE1	YLR007W	ADH2	P00331	348 aa	Known RBP	4.01	□□□□□ -1.77
NSE1	YLR007W	HIS4	P00815	799 aa	Known RBP	4.01	□□□□□ -1.77
NSE1	YLR007W	CDC33	P07260	213 aa	Known RBP	4.01	□□□□□ -1.77
NSE1	YLR007W	IMA3	P0CW40	589 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms