RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	UAF30	Q08747	228 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	YDL176W	Q12027	708 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	BMT6	Q12291	365 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	MHT1	Q12525	324 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	YCL012C	Q8J0M4	134 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	SAS5	Q99314	248 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	POL2	P21951	2222 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	MSS18	P08593	268 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	RPS4A	P0CX35	261 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	RPS4B	P0CX36	261 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	PDC5	P16467	563 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	URE2	P23202	354 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
DOA1	YKL213C	CAM1	P29547	415 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	EDS1	P38073	919 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	AXL2	P38928	823 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	GGC1	P38988	300 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	UME6	P39001	836 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	CEM1	P39525	442 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	SEC72	P39742	193 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	NTA1	P40354	457 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	SLD3	P53135	668 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	DAM1	P53267	343 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	TNA1	P53322	534 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	NRM1	P53718	249 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	RHO3	Q00245	231 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	RPL6A	Q02326	176 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	CTF19	Q02732	369 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	GIP3	Q03016	1276 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	MMT1	Q03218	510 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	NGL2	Q03264	515 aa	Known RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	PML1	Q07930	204 aa	Predicted RBP	4.63	□□□□□ -1.67
DOA1	YKL213C	INP53	Q12271	1107 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	DCN1	Q12395	269 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	Q0144	Q9ZZW2	109 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	STT4	P37297	1900 aa		4.63	□□□□□ -1.67
DOA1	YKL213C	GPH1	P06738	902 aa	Known RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	DST1	P07273	309 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	FRS1	P15624	595 aa	Known RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	SGV1	P23293	657 aa	Known RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	CPR4	P25334	318 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	PDB1	P32473	366 aa	Known RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	STE14	P32584	239 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	SSE2	P32590	693 aa	Known RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	PDR3	P33200	976 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	SPO23	P33757	523 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	EMC3	P36039	253 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	RCN1	P36054	211 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	ARA1	P38115	344 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	TSC10	P38342	320 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	YHR033W	P38690	423 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	YHL008C	P38750	627 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	BOL3	P39724	118 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	GID8	P40208	455 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	MEP2	P41948	499 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	MRK1	P50873	501 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	IMA1	P53051	589 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	PRP38	Q00723	242 aa	Predicted RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	SKI8	Q02793	397 aa	Predicted RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	PRM15	Q03262	622 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	YDR124W	Q04608	324 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	BNA5	Q05979	453 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	YPR127W	Q06494	345 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	LUC7	Q07508	261 aa	Predicted RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	SLF1	Q12034	447 aa	Known RBP	4.62	□□□□□ -1.67
DOA1	YKL213C	ULA1	Q12059	462 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	HAL9	Q12180	1030 aa		4.62	□□□□□ -1.67
DOA1	YKL213C	HTA2	P04912	132 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	CBS1	P14066	229 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	IFM1	P25038	676 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	MSS1	P32559	526 aa	Predicted RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	KKQ8	P36004	724 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	FRE2	P36033	711 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	ANR2	P36090	516 aa	Predicted RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	YCR087C-A	P37263	153 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	PLB1	P39105	664 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	YEL068C	P39977	110 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	PAC11	P40960	533 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	CAF16	P43569	289 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	PTR3	P43606	678 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	MTR3	P48240	250 aa	Predicted RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	ERG26	P53199	349 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	SSY1	Q03770	852 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	YDR248C	Q03786	193 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	MRPL1	Q04599	285 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	CDA1	Q06702	301 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	YPR202W	Q08993	238 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	YOR114W	Q12219	294 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	ISN1	Q99312	450 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	MET2	P08465	486 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	RPS21A	P0C0V8	87 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	MRPL33	P20084	86 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	PRI2	P20457	528 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	RNQ1	P25367	405 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	DGR2	P32330	852 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	CDC13	P32797	924 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	SFC1	P33303	322 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	WBP1	P33767	430 aa	Known RBP	4.61	□□□□□ -1.67
DOA1	YKL213C	SCO2	P38072	301 aa		4.61	□□□□□ -1.67
DOA1	YKL213C	ECM31	P38122	312 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms