RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W JEM1P40358 645 aa5.84□□□□□ -1.47
MSP1YGR028W LAS21P40367 830 aa5.84□□□□□ -1.47
MSP1YGR028W ECO1P43605 281 aa5.84□□□□□ -1.47
MSP1YGR028W NOP9P47077 666 aaKnown RBP5.84□□□□□ -1.47
MSP1YGR028W YJR096WP47137 282 aa5.84□□□□□ -1.47
MSP1YGR028W SEH1P53011 349 aaKnown RBP5.84□□□□□ -1.47
MSP1YGR028W COX18P53239 316 aa5.84□□□□□ -1.47
MSP1YGR028W YPL107WQ02873 248 aa5.84□□□□□ -1.47
MSP1YGR028W EFR3Q03653 782 aaKnown RBP5.84□□□□□ -1.47
MSP1YGR028W YEH1Q07804 573 aa5.84□□□□□ -1.47
MSP1YGR028W YOR365CQ08844 703 aa5.84□□□□□ -1.47
MSP1YGR028W FDH1Q08911 376 aa5.84□□□□□ -1.47
MSP1YGR028W NOP58Q12499 511 aaKnown RBP5.84□□□□□ -1.47
MSP1YGR028W CCA1P21269 546 aa5.83□□□□□ -1.48
MSP1YGR028W PRP19P32523 503 aaKnown RBP5.83□□□□□ -1.48
MSP1YGR028W MTH1P35198 433 aa5.83□□□□□ -1.48
MSP1YGR028W LHS1P36016 881 aa5.83□□□□□ -1.48
MSP1YGR028W VPS41P38959 992 aa5.83□□□□□ -1.48
MSP1YGR028W YEL020CP39994 560 aa5.83□□□□□ -1.48
MSP1YGR028W APS3P47064 194 aa5.83□□□□□ -1.48
MSP1YGR028W EMC2P47133 292 aaKnown RBP5.83□□□□□ -1.48
MSP1YGR028W SMX3P54999 86 aaPredicted RBP5.83□□□□□ -1.48
MSP1YGR028W LGE1Q02796 332 aaKnown RBP5.83□□□□□ -1.48
MSP1YGR028W CGI121Q03705 181 aaKnown RBP5.83□□□□□ -1.48
MSP1YGR028W SMA2Q04658 369 aa5.83□□□□□ -1.48
MSP1YGR028W YLR352WQ06479 807 aa5.83□□□□□ -1.48
MSP1YGR028W YPR172WQ06608 200 aa5.83□□□□□ -1.48
MSP1YGR028W BAG7Q12128 409 aa5.83□□□□□ -1.48
MSP1YGR028W PAR32Q12515 295 aaKnown RBP5.83□□□□□ -1.48
MSP1YGR028W ARF1P11076 181 aaKnown RBP5.82□□□□□ -1.48
MSP1YGR028W MRP13P12686 339 aa5.82□□□□□ -1.48
MSP1YGR028W PHO81P17442 1178 aa5.82□□□□□ -1.48
MSP1YGR028W NUP2P32499 720 aa5.82□□□□□ -1.48
MSP1YGR028W FRE2P36033 711 aa5.82□□□□□ -1.48
MSP1YGR028W MRPL17P36528 281 aa5.82□□□□□ -1.48
MSP1YGR028W SCO2P38072 301 aa5.82□□□□□ -1.48
MSP1YGR028W GET2P40056 285 aa5.82□□□□□ -1.48
MSP1YGR028W PIG2P40187 538 aa5.82□□□□□ -1.48
MSP1YGR028W RIC1P40395 1056 aa5.82□□□□□ -1.48
MSP1YGR028W GZF3P42944 551 aaKnown RBP5.82□□□□□ -1.48
MSP1YGR028W QRI1P43123 477 aaKnown RBP5.82□□□□□ -1.48
MSP1YGR028W RPE1P46969 238 aa5.82□□□□□ -1.48
MSP1YGR028W RPS12P48589 143 aaKnown RBP5.82□□□□□ -1.48
MSP1YGR028W INP1Q03694 420 aa5.82□□□□□ -1.48
MSP1YGR028W HFD1Q04458 532 aa5.82□□□□□ -1.48
MSP1YGR028W YOL131WQ08270 108 aa5.82□□□□□ -1.48
MSP1YGR028W RPN6Q12377 434 aa5.82□□□□□ -1.48
MSP1YGR028W PSF1Q12488 208 aa5.82□□□□□ -1.48
MSP1YGR028W YPT6Q99260 215 aa5.82□□□□□ -1.48
MSP1YGR028W PHO2P07269 559 aa5.81□□□□□ -1.48
MSP1YGR028W AAC3P18238 307 aa5.81□□□□□ -1.48
MSP1YGR028W PRP28P23394 588 aa5.81□□□□□ -1.48
MSP1YGR028W HSP150P32478 413 aa5.81□□□□□ -1.48
MSP1YGR028W MRE11P32829 692 aa5.81□□□□□ -1.48
MSP1YGR028W AST2P39945 430 aaKnown RBP5.81□□□□□ -1.48
MSP1YGR028W RGI1P40043 161 aaPredicted RBP5.81□□□□□ -1.48
MSP1YGR028W YIL169CP40442 995 aa5.81□□□□□ -1.48
MSP1YGR028W GAB1P41733 394 aa5.81□□□□□ -1.48
MSP1YGR028W PAC10P48363 199 aa5.81□□□□□ -1.48
MSP1YGR028W IMA1P53051 589 aa5.81□□□□□ -1.48
MSP1YGR028W PDR16P53860 351 aaKnown RBP5.81□□□□□ -1.48
MSP1YGR028W YLR460CP54007 376 aa5.81□□□□□ -1.48
MSP1YGR028W GIS1Q03833 894 aa5.81□□□□□ -1.48
MSP1YGR028W MIX14Q04341 121 aa5.81□□□□□ -1.48
MSP1YGR028W YMR310CQ04867 317 aaPredicted RBP5.81□□□□□ -1.48
MSP1YGR028W BSC1Q12140 328 aa5.81□□□□□ -1.48
MSP1YGR028W YOR032W-AQ8TGS1 66 aa5.81□□□□□ -1.48
MSP1YGR028W TAD3Q9URQ3 322 aa5.81□□□□□ -1.48
MSP1YGR028W SLH1P53327 1967 aaKnown RBP5.8□□□□□ -1.48
MSP1YGR028W ARG3P05150 338 aa5.8□□□□□ -1.48
MSP1YGR028W BAR1P12630 587 aa5.8□□□□□ -1.48
MSP1YGR028W NCP1P16603 691 aaKnown RBP5.8□□□□□ -1.48
MSP1YGR028W ERG8P24521 451 aa5.8□□□□□ -1.48
MSP1YGR028W DMC1P25453 334 aa5.8□□□□□ -1.48
MSP1YGR028W PTC6P25646 442 aa5.8□□□□□ -1.48
MSP1YGR028W RAD14P28519 371 aa5.8□□□□□ -1.48
MSP1YGR028W MKK1P32490 508 aa5.8□□□□□ -1.48
MSP1YGR028W SIP2P34164 415 aaKnown RBP5.8□□□□□ -1.48
MSP1YGR028W TUL1P36096 758 aa5.8□□□□□ -1.48
MSP1YGR028W YHR177WP38867 453 aa5.8□□□□□ -1.48
MSP1YGR028W RIX1P38883 763 aaPredicted RBP5.8□□□□□ -1.48
MSP1YGR028W PKP1P40530 394 aa5.8□□□□□ -1.48
MSP1YGR028W TRS85P46944 698 aa5.8□□□□□ -1.48
MSP1YGR028W BSC5P53755 489 aa5.8□□□□□ -1.48
MSP1YGR028W RPM2Q02773 1202 aa5.8□□□□□ -1.48
MSP1YGR028W YLR446WQ06204 433 aa5.8□□□□□ -1.48
MSP1YGR028W YLR413WQ06689 675 aa5.8□□□□□ -1.48
MSP1YGR028W YFR010W-AP0C5N0 62 aa5.79□□□□□ -1.48
MSP1YGR028W KGD1P20967 1014 aaKnown RBP5.79□□□□□ -1.48
MSP1YGR028W LTV1P34078 463 aa5.79□□□□□ -1.48
MSP1YGR028W ANS1P38832 159 aa5.79□□□□□ -1.48
MSP1YGR028W HRB1P38922 454 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
MSP1YGR028W YNL208WP40159 199 aaKnown RBP5.79□□□□□ -1.48
MSP1YGR028W BNA3P47039 444 aaKnown RBP5.79□□□□□ -1.48
MSP1YGR028W ARC35P53731 342 aaKnown RBP5.79□□□□□ -1.48
MSP1YGR028W YSA1Q01976 231 aa5.79□□□□□ -1.48
MSP1YGR028W PFA5Q03289 374 aa5.79□□□□□ -1.48
MSP1YGR028W VBA4Q04602 768 aaKnown RBP5.79□□□□□ -1.48
MSP1YGR028W PAL1Q05518 499 aaKnown RBP5.79□□□□□ -1.48
MSP1YGR028W DCI1Q08558 271 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms