RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W MHR1Q06630 226 aa2.79□□□□□ -1.96
SEC4YFL005W STF1P01098 86 aa2.78□□□□□ -1.96
SEC4YFL005W FAR1P21268 830 aa2.78□□□□□ -1.96
SEC4YFL005W RPL16AP26784 199 aaKnown RBP2.78□□□□□ -1.96
SEC4YFL005W SPR1P32603 445 aa2.78□□□□□ -1.96
SEC4YFL005W SRB2P34162 210 aa2.78□□□□□ -1.96
SEC4YFL005W YKR015CP36111 568 aa2.78□□□□□ -1.96
SEC4YFL005W BAT1P38891 393 aaKnown RBP2.78□□□□□ -1.96
SEC4YFL005W ALP1P38971 573 aa2.78□□□□□ -1.96
SEC4YFL005W RBG1P39729 369 aa2.78□□□□□ -1.96
SEC4YFL005W YER186CP40101 306 aa2.78□□□□□ -1.96
SEC4YFL005W DFG10P40526 253 aa2.78□□□□□ -1.96
SEC4YFL005W KEG1P43614 200 aa2.78□□□□□ -1.96
SEC4YFL005W CTK3P46963 296 aaPredicted RBP2.78□□□□□ -1.96
SEC4YFL005W YGL039WP53183 348 aaKnown RBP2.78□□□□□ -1.96
SEC4YFL005W LST7P53237 242 aa2.78□□□□□ -1.96
SEC4YFL005W CWC22P53333 577 aaKnown RBP2.78□□□□□ -1.96
SEC4YFL005W YLR152CP54072 576 aa2.78□□□□□ -1.96
SEC4YFL005W SKI8Q02793 397 aaPredicted RBP2.78□□□□□ -1.96
SEC4YFL005W NAT4Q04751 285 aa2.78□□□□□ -1.96
SEC4YFL005W SPH1Q06160 661 aa2.78□□□□□ -1.96
SEC4YFL005W TMC1Q08422 150 aaPredicted RBP2.78□□□□□ -1.96
SEC4YFL005W HMS1Q12398 434 aa2.78□□□□□ -1.96
SEC4YFL005W DET1Q99288 334 aaKnown RBP2.78□□□□□ -1.96
SEC4YFL005W HEM4P06174 275 aa2.77□□□□□ -1.97
SEC4YFL005W YLL053CP0CD98 152 aa2.77□□□□□ -1.97
SEC4YFL005W ARF2P19146 181 aaKnown RBP2.77□□□□□ -1.97
SEC4YFL005W GIT1P25346 518 aa2.77□□□□□ -1.97
SEC4YFL005W CHA1P25379 360 aaKnown RBP2.77□□□□□ -1.97
SEC4YFL005W MXR2P25566 168 aa2.77□□□□□ -1.97
SEC4YFL005W CDC50P25656 391 aa2.77□□□□□ -1.97
SEC4YFL005W ZUO1P32527 433 aaKnown RBP2.77□□□□□ -1.97
SEC4YFL005W MRPS5P33759 307 aa2.77□□□□□ -1.97
SEC4YFL005W OM14P38325 134 aa2.77□□□□□ -1.97
SEC4YFL005W LIN1P38852 340 aaPredicted RBP2.77□□□□□ -1.97
SEC4YFL005W PRP39P39682 629 aaKnown RBP2.77□□□□□ -1.97
SEC4YFL005W YGL114WP53134 725 aa2.77□□□□□ -1.97
SEC4YFL005W YNL146WP53906 100 aa2.77□□□□□ -1.97
SEC4YFL005W APC5Q08683 685 aa2.77□□□□□ -1.97
SEC4YFL005W REX3Q12090 404 aa2.77□□□□□ -1.97
SEC4YFL005W YDL109CQ12103 647 aa2.77□□□□□ -1.97
SEC4YFL005W RNR2P09938 399 aaKnown RBP2.76□□□□□ -1.97
SEC4YFL005W IST2P38250 946 aa2.76□□□□□ -1.97
SEC4YFL005W PEX32P38292 413 aa2.76□□□□□ -1.97
SEC4YFL005W SLX1P38324 304 aa2.76□□□□□ -1.97
SEC4YFL005W ATG7P38862 630 aa2.76□□□□□ -1.97
SEC4YFL005W YJR030CP47101 745 aa2.76□□□□□ -1.97
SEC4YFL005W PRO2P54885 456 aaKnown RBP2.76□□□□□ -1.97
SEC4YFL005W MSC3Q05812 728 aa2.76□□□□□ -1.97
SEC4YFL005W YHC1Q05900 231 aaKnown RBP2.76□□□□□ -1.97
SEC4YFL005W LIP2Q06005 328 aa2.76□□□□□ -1.97
SEC4YFL005W MCT1Q12283 360 aa2.76□□□□□ -1.97
SEC4YFL005W HIF1Q12373 385 aa2.76□□□□□ -1.97
SEC4YFL005W UBA3Q99344 299 aa2.76□□□□□ -1.97
SEC4YFL005W STE7P06784 515 aa2.75□□□□□ -1.97
SEC4YFL005W RPL23AP0CX41 137 aaKnown RBP2.75□□□□□ -1.97
SEC4YFL005W RPL23BP0CX42 137 aaKnown RBP2.75□□□□□ -1.97
SEC4YFL005W ZRC1P20107 442 aa2.75□□□□□ -1.97
SEC4YFL005W DEP1P31385 405 aa2.75□□□□□ -1.97
SEC4YFL005W YPT35P38815 214 aaKnown RBP2.75□□□□□ -1.97
SEC4YFL005W RTC5Q12108 567 aaKnown RBP2.75□□□□□ -1.97
SEC4YFL005W SFM1Q12314 213 aa2.75□□□□□ -1.97
SEC4YFL005W YDR262WQ12331 272 aa2.75□□□□□ -1.97
SEC4YFL005W RGS2Q99188 309 aa2.75□□□□□ -1.97
SEC4YFL005W PRB1P09232 635 aa2.74□□□□□ -1.97
SEC4YFL005W GAL3P13045 520 aa2.74□□□□□ -1.97
SEC4YFL005W UTR1P21373 530 aa2.74□□□□□ -1.97
SEC4YFL005W CIN8P27895 1000 aa2.74□□□□□ -1.97
SEC4YFL005W LDS1P31379 325 aa2.74□□□□□ -1.97
SEC4YFL005W MKK1P32490 508 aa2.74□□□□□ -1.97
SEC4YFL005W SUR1P33300 382 aa2.74□□□□□ -1.97
SEC4YFL005W TIM17P39515 158 aa2.74□□□□□ -1.97
SEC4YFL005W TIS11P47977 285 aa2.74□□□□□ -1.97
SEC4YFL005W VPS20Q04272 221 aa2.74□□□□□ -1.97
SEC4YFL005W FSH2Q05015 223 aa2.74□□□□□ -1.97
SEC4YFL005W SPO24Q3E752 67 aa2.74□□□□□ -1.97
SEC4YFL005W CDC37P06101 506 aaKnown RBP2.73□□□□□ -1.97
SEC4YFL005W RAD1P06777 1100 aa2.73□□□□□ -1.97
SEC4YFL005W DCC1P25559 380 aa2.73□□□□□ -1.97
SEC4YFL005W ERG9P29704 444 aa2.73□□□□□ -1.97
SEC4YFL005W PFS1P38872 237 aa2.73□□□□□ -1.97
SEC4YFL005W YDR089WP38966 869 aa2.73□□□□□ -1.97
SEC4YFL005W BTT1P40314 149 aaPredicted RBP2.73□□□□□ -1.97
SEC4YFL005W VAC7P53950 1165 aa2.73□□□□□ -1.97
SEC4YFL005W PRP38Q00723 242 aaPredicted RBP2.73□□□□□ -1.97
SEC4YFL005W HAL1Q01766 294 aa2.73□□□□□ -1.97
SEC4YFL005W CSM3Q04659 317 aa2.73□□□□□ -1.97
SEC4YFL005W GAS2Q06135 555 aa2.73□□□□□ -1.97
SEC4YFL005W ATP16Q12165 160 aa2.73□□□□□ -1.97
SEC4YFL005W HSP26P15992 214 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
SEC4YFL005W MIR1P23641 311 aaKnown RBP2.72□□□□□ -1.97
SEC4YFL005W PET18P25362 215 aa2.72□□□□□ -1.97
SEC4YFL005W GPI18P38211 433 aa2.72□□□□□ -1.97
SEC4YFL005W IML3P38265 245 aa2.72□□□□□ -1.97
SEC4YFL005W MMS21P38632 267 aa2.72□□□□□ -1.97
SEC4YFL005W SSO2P39926 295 aa2.72□□□□□ -1.97
SEC4YFL005W OSW5P40219 148 aa2.72□□□□□ -1.97
SEC4YFL005W YCH1P42937 148 aa2.72□□□□□ -1.97
SEC4YFL005W IGD1P43598 195 aa2.72□□□□□ -1.97
SEC4YFL005W AIM23P47015 356 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms