RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W MRPL27P36526 146 aaPredicted RBP2.49□□□□□ -2.01
RSM28YDR494W YHR182WP38870 785 aa2.49□□□□□ -2.01
RSM28YDR494W PEX22P39718 180 aa2.49□□□□□ -2.01
RSM28YDR494W HEM14P40012 539 aa2.49□□□□□ -2.01
RSM28YDR494W VHT1P53241 593 aa2.49□□□□□ -2.01
RSM28YDR494W VAC7P53950 1165 aa2.49□□□□□ -2.01
RSM28YDR494W YDR115WQ04598 105 aa2.49□□□□□ -2.01
RSM28YDR494W SFM1Q12314 213 aa2.49□□□□□ -2.01
RSM28YDR494W SKS1Q12505 502 aa2.49□□□□□ -2.01
RSM28YDR494W ASP3-2P0CX77 362 aa2.48□□□□□ -2.01
RSM28YDR494W ASP3-3P0CX78 362 aa2.48□□□□□ -2.01
RSM28YDR494W ASP3-4P0CX79 362 aa2.48□□□□□ -2.01
RSM28YDR494W ASP3-1P0CZ17 362 aa2.48□□□□□ -2.01
RSM28YDR494W MAS2P11914 482 aa2.48□□□□□ -2.01
RSM28YDR494W DAP2P18962 818 aa2.48□□□□□ -2.01
RSM28YDR494W UBA1P22515 1024 aaKnown RBP2.48□□□□□ -2.01
RSM28YDR494W ANP1P32629 500 aa2.48□□□□□ -2.01
RSM28YDR494W COS9P36034 407 aa2.48□□□□□ -2.01
RSM28YDR494W YNR068CP53754 272 aa2.48□□□□□ -2.01
RSM28YDR494W YPL107WQ02873 248 aa2.48□□□□□ -2.01
RSM28YDR494W AIM33Q04516 312 aa2.48□□□□□ -2.01
RSM28YDR494W YPR078CQ06813 372 aa2.48□□□□□ -2.01
RSM28YDR494W ATP16Q12165 160 aa2.48□□□□□ -2.01
RSM28YDR494W FSH3Q99369 266 aa2.48□□□□□ -2.01
RSM28YDR494W RPL23AP0CX41 137 aaKnown RBP2.47□□□□□ -2.01
RSM28YDR494W RPL23BP0CX42 137 aaKnown RBP2.47□□□□□ -2.01
RSM28YDR494W PHO84P25297 587 aaKnown RBP2.47□□□□□ -2.01
RSM28YDR494W DPH2P32461 534 aa2.47□□□□□ -2.01
RSM28YDR494W VAM7P32912 316 aa2.47□□□□□ -2.01
RSM28YDR494W ECT1P33412 323 aa2.47□□□□□ -2.01
RSM28YDR494W YBR241CP38142 488 aa2.47□□□□□ -2.01
RSM28YDR494W YJR030CP47101 745 aa2.47□□□□□ -2.01
RSM28YDR494W SEH1P53011 349 aaKnown RBP2.47□□□□□ -2.01
RSM28YDR494W RPL21AQ02753 160 aaKnown RBP2.47□□□□□ -2.01
RSM28YDR494W GAS2Q06135 555 aa2.47□□□□□ -2.01
RSM28YDR494W YOL075CQ08234 1294 aa2.47□□□□□ -2.01
RSM28YDR494W RPL21BQ12672 160 aaKnown RBP2.47□□□□□ -2.01
RSM28YDR494W DET1Q99288 334 aaKnown RBP2.47□□□□□ -2.01
RSM28YDR494W UNG1P12887 359 aa2.46□□□□□ -2.02
RSM28YDR494W ZUO1P32527 433 aaKnown RBP2.46□□□□□ -2.02
RSM28YDR494W TOA1P32773 286 aa2.46□□□□□ -2.02
RSM28YDR494W YKR015CP36111 568 aa2.46□□□□□ -2.02
RSM28YDR494W ADH5P38113 351 aaKnown RBP2.46□□□□□ -2.02
RSM28YDR494W LCP5P40079 357 aaPredicted RBP2.46□□□□□ -2.02
RSM28YDR494W YFL012WP43580 148 aa2.46□□□□□ -2.02
RSM28YDR494W FLC3P53121 802 aa2.46□□□□□ -2.02
RSM28YDR494W RNH201P53942 307 aa2.46□□□□□ -2.02
RSM28YDR494W UTP6Q02354 440 aaKnown RBP2.46□□□□□ -2.02
RSM28YDR494W SRO7Q12038 1033 aa2.46□□□□□ -2.02
RSM28YDR494W GLE1Q12315 538 aa2.46□□□□□ -2.02
RSM28YDR494W LDB17Q12342 491 aa2.46□□□□□ -2.02
RSM28YDR494W HIF1Q12373 385 aa2.46□□□□□ -2.02
RSM28YDR494W MAS1P10507 462 aa2.45□□□□□ -2.02
RSM28YDR494W THR4P16120 514 aaKnown RBP2.45□□□□□ -2.02
RSM28YDR494W MIR1P23641 311 aaKnown RBP2.45□□□□□ -2.02
RSM28YDR494W PDC2P32896 925 aa2.45□□□□□ -2.02
RSM28YDR494W PTK1P36002 662 aaPredicted RBP2.45□□□□□ -2.02
RSM28YDR494W LAS1P36146 502 aaPredicted RBP2.45□□□□□ -2.02
RSM28YDR494W RPA34P47006 233 aaPredicted RBP2.45□□□□□ -2.02
RSM28YDR494W BIO3P50277 480 aa2.45□□□□□ -2.02
RSM28YDR494W VEL1P53058 206 aa2.45□□□□□ -2.02
RSM28YDR494W SLT2Q00772 484 aa2.45□□□□□ -2.02
RSM28YDR494W SMP3Q04174 516 aa2.45□□□□□ -2.02
RSM28YDR494W YMR310CQ04867 317 aaPredicted RBP2.45□□□□□ -2.02
RSM28YDR494W NFI1Q12216 726 aa2.45□□□□□ -2.02
RSM28YDR494W UBA3Q99344 299 aa2.45□□□□□ -2.02
RSM28YDR494W RPS16AP0CX51 143 aaKnown RBP2.44□□□□□ -2.02
RSM28YDR494W RPS16BP0CX52 143 aaKnown RBP2.44□□□□□ -2.02
RSM28YDR494W RDS1P25611 832 aa2.44□□□□□ -2.02
RSM28YDR494W YPT35P38815 214 aaKnown RBP2.44□□□□□ -2.02
RSM28YDR494W RBG1P39729 369 aa2.44□□□□□ -2.02
RSM28YDR494W YER184CP39961 794 aa2.44□□□□□ -2.02
RSM28YDR494W AIM23P47015 356 aa2.44□□□□□ -2.02
RSM28YDR494W CDH1P53197 566 aa2.44□□□□□ -2.02
RSM28YDR494W LST7P53237 242 aa2.44□□□□□ -2.02
RSM28YDR494W YOR376WQ08900 122 aa2.44□□□□□ -2.02
RSM28YDR494W YOR012WQ12351 137 aa2.44□□□□□ -2.02
RSM28YDR494W AIM45Q12480 344 aaKnown RBP2.44□□□□□ -2.02
RSM28YDR494W SFG1Q12507 346 aa2.44□□□□□ -2.02
RSM28YDR494W RPS14AP06367 137 aaKnown RBP2.43□□□□□ -2.02
RSM28YDR494W PUT4P15380 627 aa2.43□□□□□ -2.02
RSM28YDR494W CKI1P20485 582 aa2.43□□□□□ -2.02
RSM28YDR494W FAR1P21268 830 aa2.43□□□□□ -2.02
RSM28YDR494W EPT1P22140 391 aa2.43□□□□□ -2.02
RSM28YDR494W GRR1P24814 1151 aa2.43□□□□□ -2.02
RSM28YDR494W PMT2P31382 759 aa2.43□□□□□ -2.02
RSM28YDR494W HMX1P32339 317 aa2.43□□□□□ -2.02
RSM28YDR494W ECM34P38728 170 aa2.43□□□□□ -2.02
RSM28YDR494W CHL4P38907 458 aa2.43□□□□□ -2.02
RSM28YDR494W RPS14BP39516 138 aaKnown RBP2.43□□□□□ -2.02
RSM28YDR494W STB1P42845 420 aa2.43□□□□□ -2.02
RSM28YDR494W YGR015CP53208 328 aa2.43□□□□□ -2.02
RSM28YDR494W YNL143CP53908 130 aa2.43□□□□□ -2.02
RSM28YDR494W IES4Q08561 116 aa2.43□□□□□ -2.02
RSM28YDR494W TPI1P00942 248 aaKnown RBP2.42□□□□□ -2.02
RSM28YDR494W SWI3P32591 825 aa2.42□□□□□ -2.02
RSM28YDR494W BLI1P35727 113 aa2.42□□□□□ -2.02
RSM28YDR494W SHE1P38200 338 aa2.42□□□□□ -2.02
RSM28YDR494W APE4P38821 490 aa2.42□□□□□ -2.02
RSM28YDR494W ATG7P38862 630 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms