RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ZNF572Q7Z3I7 529 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 RBM46Q8TBY0 533 aaKnown RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 SYTL5Q8TDW5 730 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 ZMYND15Q9H091 742 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 AGO4Q9HCK5 861 aaKnown RBP18.69■□□□□ 0.58
PHGDH-211ENST00000641213 GCNT4Q9P109 453 aa18.69■□□□□ 0.58
PHGDH-211ENST00000641213 RLFQ13129 1914 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 NCK2O43639 380 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 FLOT1O75955 427 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 P4HBP07237 508 aaKnown RBP18.68■□□□□ 0.58
PHGDH-211ENST00000641213 RPS12P25398 132 aaKnown RBP18.68■□□□□ 0.58
PHGDH-211ENST00000641213 C2orf54Q08AI8 447 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 IQCEQ6IPM2 695 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 ZNF571Q7Z3V5 609 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-211ENST00000641213 DAW1Q8N136 415 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 MKNK1Q9BUB5 465 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 STRA6Q9BX79 667 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 TLR10Q9BXR5 811 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 DMAC2Q9NW81 257 aa18.68■□□□□ 0.58
PHGDH-211ENST00000641213 MAP3K20Q9NYL2 800 aaKnown RBP18.68■□□□□ 0.58
PHGDH-211ENST00000641213 AJAP1Q9UKB5 411 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-211ENST00000641213 BZW2Q9Y6E2 419 aaKnown RBP18.68■□□□□ 0.58
PHGDH-211ENST00000641213 ASTN2O75129 1339 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-211ENST00000641213 VCAM1P19320 739 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 KLRC1P26715 233 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 OAS2P29728 719 aaKnown RBP18.67■□□□□ 0.58
PHGDH-211ENST00000641213 NAP1L1P55209 391 aaKnown RBP18.67■□□□□ 0.58
PHGDH-211ENST00000641213 JAM2P57087 298 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 MTMR2Q13614 643 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 PADI6Q6TGC4 694 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 HS2ST1Q7LGA3 356 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 TAAR1Q96RJ0 339 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 PACSIN1Q9BY11 444 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 AGPAT3Q9NRZ7 376 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 ZHX2Q9Y6X8 837 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 PPP1R12BO60237 982 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-211ENST00000641213 PPP1R37O75864 691 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 ZBTB7AO95365 584 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 ITIH3Q06033 890 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 KIAA0753Q2KHM9 967 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 SAMD7Q7Z3H4 446 aa18.67■□□□□ 0.58
PHGDH-211ENST00000641213 MCM3P25205 808 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 CXCR5P32302 372 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 PRKCIP41743 596 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 RPS6P62753 249 aaKnown RBP18.66■□□□□ 0.58
PHGDH-211ENST00000641213 MTMR1Q13613 665 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 MICALL2Q8IY33 904 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 MMGT1Q8N4V1 131 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
PHGDH-211ENST00000641213 SAMD3Q8N6K7 520 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 PSMB7Q99436 277 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 PHIPQ8WWQ0 1821 aa18.66■□□□□ 0.58
PHGDH-211ENST00000641213 POLR3GO15318 223 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-211ENST00000641213 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
PHGDH-211ENST00000641213 CYP2J2P51589 502 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 PGM5Q15124 567 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 C10orf76Q5T2E6 689 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 GJB7Q6PEY0 223 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 RPAP3Q9H6T3 665 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-211ENST00000641213 HACL1Q9UJ83 578 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 DBR1Q9UK59 544 aaKnown RBP18.65■□□□□ 0.58
PHGDH-211ENST00000641213 FRMD4BQ9Y2L6 1034 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 SAMM50Q9Y512 469 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 PALMO75781 387 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 FMO5P49326 533 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 GMPSP49915 693 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-211ENST00000641213 CASP8Q14790 479 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 TBC1D10BQ4KMP7 808 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-211ENST00000641213 ZCCHC17Q9NP64 241 aaKnown RBP18.65■□□□□ 0.58
PHGDH-211ENST00000641213 TSKSQ9UJT2 592 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 PCDHGC5Q9Y5F6 944 aa18.65■□□□□ 0.58
PHGDH-211ENST00000641213 DOCK5Q9H7D0 1870 aa18.64■□□□□ 0.58
PHGDH-211ENST00000641213 QARSP47897 775 aaKnown RBP18.64■□□□□ 0.57
PHGDH-211ENST00000641213 FAM193AP78312 1265 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 SPP2Q13103 211 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 NBPF12Q5TAG4 269 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-211ENST00000641213 MAEAQ7L5Y9 396 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 SPATA4Q8NEY3 305 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 GOLGA5Q8TBA6 731 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 TRERF1Q96PN7 1200 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 TBC1D22BQ9NU19 505 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 CTDP1Q9Y5B0 961 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-211ENST00000641213 BTNL10A8MVZ5 291 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 H3BQF6 201 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 K7ENM7 598 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 ZBED4O75132 1171 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 RARRES1P49788 294 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 PLS1Q14651 629 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 ZNF771Q7L3S4 317 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-211ENST00000641213 SLC9A9Q8IVB4 645 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 SYCP3Q8IZU3 236 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 PDE11AQ9HCR9 933 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 EHD2Q9NZN4 543 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 CNOT7Q9UIV1 285 aaKnown RBP18.64■□□□□ 0.57
PHGDH-211ENST00000641213 NAGPAQ9UK23 515 aa18.64■□□□□ 0.57
PHGDH-211ENST00000641213 LYPLA2O95372 231 aa18.63■□□□□ 0.57
PHGDH-211ENST00000641213 MYCLP12524 364 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-211ENST00000641213 PPP2R5AQ15172 486 aa18.63■□□□□ 0.57
PHGDH-211ENST00000641213 CCDC181Q5TID7 509 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms