RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 USP2O75604 605 aaPredicted RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 EIF3JO75822 258 aaKnown RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 LCA5LO95447 670 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 OSBPP22059 807 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 MCM3P25205 808 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 RARRES1P49788 294 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 KIF11P52732 1056 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 DMP1Q13316 513 aaPredicted RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 ASIC2Q16515 512 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 XKR9Q5GH70 373 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 DCAF17Q5H9S7 520 aaPredicted RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 ARMC9Q7Z3E5 817 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 RNF10Q8N5U6 811 aaKnown RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 GPR161Q8N6U8 529 aaKnown RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 ACRBPQ8NEB7 543 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 REPS2Q8NFH8 660 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 SECISBP2LQ93073 1101 aaKnown RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 IFT74Q96LB3 600 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 CHP1Q99653 195 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 JPH1Q9HDC5 661 aaPredicted RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 CYP39A1Q9NYL5 469 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 SLC9A2Q9UBY0 812 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 CDC23Q9UJX2 597 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 GUCA1BQ9UMX6 200 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 SCAF8Q9UPN6 1271 aaKnown RBP9.11□□□□□ -0.95
PNKP-231ENST00000640501 PPME1Q9Y570 386 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 MRFAP1Q9Y605 127 aa9.11□□□□□ -0.95
PNKP-231ENST00000640501 SMCHD1A6NHR9 2005 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 ASTN1O14525 1302 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
PNKP-231ENST00000640501 RSPH10B2B2RC85 870 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 P4HA2O15460 535 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 DGAT1O75907 488 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 GFPT2O94808 682 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 RSPH10BP0C881 870 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 FERP16591 822 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 RTP1P59025 263 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 POLR2FP61218 127 aaKnown RBP9.1□□□□□ -0.95
PNKP-231ENST00000640501 RBM10P98175 930 aaKnown RBP9.1□□□□□ -0.95
PNKP-231ENST00000640501 NCBP1Q09161 790 aaKnown RBP9.1□□□□□ -0.95
PNKP-231ENST00000640501 KLHL30Q0D2K2 578 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 ITGB3BPQ13352 177 aaPredicted RBP9.1□□□□□ -0.95
PNKP-231ENST00000640501 RAPGEF1Q13905 1077 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 VGLL4Q14135 290 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 TTLL12Q14166 644 aaPredicted RBP9.1□□□□□ -0.95
PNKP-231ENST00000640501 TMEM132BQ14DG7 1078 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 WDR59Q6PJI9 974 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 LBX2Q6XYB7 198 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 GADL1Q6ZQY3 521 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 SRGAP1Q7Z6B7 1085 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 RIOX2Q8IUF8 465 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 C12orf56Q8IXR9 622 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 GLIS3Q8NEA6 775 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 FAM81BQ96LP2 452 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 FHDC1Q9C0D6 1143 aaPredicted RBP9.1□□□□□ -0.95
PNKP-231ENST00000640501 AGPAT3Q9NRZ7 376 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 AIPL1Q9NZN9 384 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 A0A0G2JMZ2 1700 aa9.1□□□□□ -0.95
PNKP-231ENST00000640501 RLFQ13129 1914 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 ATP8B3O60423 1300 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 SSC5DA1L4H1 1573 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 CTAGE15A4D2H0 777 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 SPATA31C2B4DYI2 1134 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 BACH1O14867 736 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 KIAA0391O15091 583 aaKnown RBP9.09□□□□□ -0.95
PNKP-231ENST00000640501 ERLIN1O75477 346 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 AKAP3O75969 853 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 DDNO94850 711 aaPredicted RBP9.09□□□□□ -0.95
PNKP-231ENST00000640501 CTAGE8P0CG41 777 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 TGFB3P10600 412 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 NMT1P30419 496 aaKnown RBP9.09□□□□□ -0.95
PNKP-231ENST00000640501 ICAM3P32942 547 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 EIF4A3P38919 411 aaKnown RBP9.09□□□□□ -0.95
PNKP-231ENST00000640501 MAGEA1P43355 309 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 KLK7P49862 253 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 CASP5P51878 434 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 HIRAP54198 1017 aaPredicted RBP9.09□□□□□ -0.95
PNKP-231ENST00000640501 NCKAP1LP55160 1127 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 GTF2BQ00403 316 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 ENPEPQ07075 957 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 PPIL2Q13356 520 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 NEDD9Q14511 834 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 GLIPR1L2Q4G1C9 344 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 XKR3Q5GH77 459 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 FAM102BQ5T8I3 360 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 FAM160B1Q5W0V3 765 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 CTAGE6Q86UF2 777 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 PNMA8AQ86V59 439 aaPredicted RBP9.09□□□□□ -0.95
PNKP-231ENST00000640501 CTAGE4Q8IX94 777 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 SLC35F6Q8N357 371 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 XXYLT1Q8NBI6 393 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 IL31RAQ8NI17 732 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 SMCR8Q8TEV9 937 aaPredicted RBP9.09□□□□□ -0.95
PNKP-231ENST00000640501 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 RABGGTAQ92696 567 aa9.09□□□□□ -0.95
PNKP-231ENST00000640501 L3MBTL3Q96JM7 780 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms