RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 GEN1Q17RS7 908 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 SLC45A4Q5BKX6 768 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 CCDC62Q6P9F0 684 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 AGR3Q8TD06 166 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 DDI1Q8WTU0 396 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 DPF3Q92784 378 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 SGK3Q96BR1 496 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 WDR24Q96S15 920 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 CCT8L2Q96SF2 557 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 EPN3Q9H201 632 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 ANKZF1Q9H8Y5 726 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 C12orf4Q9NQ89 552 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 FAM114A2Q9NRY5 505 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 RRN3Q9NYV6 651 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 EHD2Q9NZN4 543 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 HMGXB4Q9UGU5 601 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 PPP2R2CQ9Y2T4 447 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 SHROOM2Q13796 1616 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 LRRC9Q6ZRR7 1453 aa6.61□□□□□ -1.35
NECAP1-222ENST00000640072 ANO9A1A5B4 782 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CACNB4O00305 520 aaPredicted RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SULT1B1O43704 296 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 RNGTTO60942 597 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TSC22D2O75157 780 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 PRPF6O94906 941 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 PGRP06401 933 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SCTRP47872 440 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 AARSP49588 968 aaKnown RBP eCLIP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ST13P50502 369 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CSTF3Q12996 717 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TUBB2AQ13885 445 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 USH1GQ495M9 461 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TATDN1Q6P1N9 297 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CPLX4Q7Z7G2 160 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 RUFY2Q8WXA3 655 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SLC7A3Q8WY07 619 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TTC17Q96AE7 1141 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 RIOK1Q9BRS2 568 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TUBB2BQ9BVA1 445 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CCDC177Q9NQR7 707 aaPredicted RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CNGB3Q9NQW8 809 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 MCM9Q9NXL9 1143 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 PNMA3Q9UL41 463 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 DUSP12Q9UNI6 340 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CFL2Q9Y281 166 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 AATKQ6ZMQ8 1374 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SYNJ2BP-COX16A0A087WUM0 186 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CTAGE9A4FU28 777 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 PCP4L1A6NKN8 68 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 A8MVJ9 347 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ENPP3O14638 875 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SPTLC1O15269 473 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CDK4P11802 303 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ACTN1P12814 892 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ATP6V1B1P15313 513 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CCND1P24385 295 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 GSTT1P30711 240 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 AP3M2P53677 418 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CSNK2BP67870 215 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 OLR1P78380 273 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ELF3P78545 371 aaPredicted RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ACY1Q03154 408 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 MAP3K12Q12852 859 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 MZT2BQ6NZ67 158 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TRIM65Q6PJ69 517 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 COG1Q8WTW3 980 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 PRAM1Q96QH2 718 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CCDC106Q9BWC9 280 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 VPS11Q9H270 941 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 BRD9Q9H8M2 597 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 NLRC4Q9NPP4 1024 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 LNPEPQ9UIQ6 1025 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SNX8Q9Y5X2 465 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SPATA31E1Q6ZUB1 1445 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 THAP12O43422 761 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TACC1O75410 805 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ATP2A2P16615 1042 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TBL3Q12788 808 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CUL4AQ13619 759 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 PLEKHG4Q58EX7 1191 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ANKRD20A2Q5SQ80 823 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ANKRD20A1Q5TYW2 823 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 NUTM2DQ5VT03 806 aaPredicted RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ANKRD20A3Q5VUR7 823 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 MAEAQ7L5Y9 396 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 C2orf69Q8N8R5 385 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 OR6C4Q8NGE1 309 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CAGE1Q8TC20 777 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ACAP3Q96P50 834 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TESK2Q96S53 571 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 DDX50Q9BQ39 737 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 RMND1Q9NWS8 449 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 CIDEBQ9UHD4 219 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 TSR3Q9UJK0 312 aaKnown RBP6.6□□□□□ -1.35
NECAP1-222ENST00000640072 ZNF521Q96K83 1311 aa6.6□□□□□ -1.35
NECAP1-222ENST00000640072 VSTM5A8MXK1 200 aa6.59□□□□□ -1.35
NECAP1-222ENST00000640072 HAT1O14929 419 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms