RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CNOT8Q9UFF9 292 aaKnown RBP15.48■□□□□ 0.07
SCARB2-208ENST00000638372 GIPC1O14908 333 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 LMNB2Q03252 620 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 GLYCTKQ8IVS8 523 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 RHOT2Q8IXI1 618 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 MYMKA6NI61 221 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 PCK1P35558 622 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 HMGCS2P54868 508 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 BASP1P80723 227 aaKnown RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 IFT88Q13099 833 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 ZNF211Q13398 564 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 CYFIP1Q7L576 1253 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 FAM81BQ96LP2 452 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 ATP6V0A4Q9HBG4 840 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 AGPAT5Q9NUQ2 364 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 ADAM22Q9P0K1 906 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 NOVA2Q9UNW9 492 aaKnown RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 SNX24Q9Y343 169 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 PXDNQ92626 1479 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 CTNND1O60716 968 aaKnown RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 PSMD6Q15008 389 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 CCNYQ8ND76 341 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 AP5M1Q9H0R1 490 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 RPF1Q9H9Y2 349 aaKnown RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 XPOTO43592 962 aaKnown RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 SLFN12LQ6IEE8 588 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 CC2D1AQ6P1N0 951 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 RSRC1Q96IZ7 334 aaKnown RBP15.47■□□□□ 0.07
SCARB2-208ENST00000638372 HEMGNQ9BXL5 484 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 PPP1R12CQ9BZL4 782 aa15.47■□□□□ 0.07
SCARB2-208ENST00000638372 A0A1W2PQC6 194 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 HSPA6P17066 643 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 VAMP7P51809 220 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 RWDD2BP57060 319 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 RINT1Q6NUQ1 792 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 TMEM270Q6UE05 265 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 HEXIM2Q96MH2 286 aaKnown RBP15.46■□□□□ 0.07
SCARB2-208ENST00000638372 TACO1Q9BSH4 297 aaKnown RBP15.46■□□□□ 0.07
SCARB2-208ENST00000638372 ANO9A1A5B4 782 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 ITKQ08881 620 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 NFX1Q12986 1120 aaKnown RBP15.46■□□□□ 0.07
SCARB2-208ENST00000638372 MAPK6Q16659 721 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 BARGINQ6ZT62 677 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 RSRC2Q7L4I2 434 aaKnown RBP15.46■□□□□ 0.07
SCARB2-208ENST00000638372 GPR75-ASB3A0A0A6YYF3 556 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 CAPN11Q9UMQ6 739 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
SCARB2-208ENST00000638372 REREQ9P2R6 1566 aa15.46■□□□□ 0.07
SCARB2-208ENST00000638372 INHBAP08476 426 aa15.46■□□□□ 0.06
SCARB2-208ENST00000638372 CDO1Q16878 200 aa15.46■□□□□ 0.06
SCARB2-208ENST00000638372 HAUS6Q7Z4H7 955 aa15.46■□□□□ 0.06
SCARB2-208ENST00000638372 NEK9Q8TD19 979 aa15.46■□□□□ 0.06
SCARB2-208ENST00000638372 DDX47Q9H0S4 455 aaKnown RBP15.46■□□□□ 0.06
SCARB2-208ENST00000638372 SNX25Q9H3E2 840 aa15.46■□□□□ 0.06
SCARB2-208ENST00000638372 NGRNQ9NPE2 291 aaKnown RBP15.46■□□□□ 0.06
SCARB2-208ENST00000638372 LIMA1Q9UHB6 759 aaKnown RBP15.46■□□□□ 0.06
SCARB2-208ENST00000638372 CD2APQ9Y5K6 639 aa15.46■□□□□ 0.06
SCARB2-208ENST00000638372 EIF3CLB5ME19 914 aaKnown RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 ACSL3O95573 720 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 ATP1A1P05023 1023 aaKnown RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 ERICH1Q86X53 443 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 FAM193BQ96PV7 902 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 OSBPL9Q96SU4 736 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 EIF3CQ99613 913 aaKnown RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 C11orf70Q9BRQ4 267 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 JMJD4Q9H9V9 463 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 HIP1RO75146 1068 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 RPUSD2Q8IZ73 545 aaKnown RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 OTUD5Q96G74 571 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 ZMYND12Q9H0C1 365 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 SEL1LQ9UBV2 794 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 PRR12Q9ULL5 1215 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 MAGED2Q9UNF1 606 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 EMBQ6PCB8 327 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 PDZD4Q76G19 769 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 RPAP3Q9H6T3 665 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-208ENST00000638372 PSMC5P62195 406 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 ZNF667Q5HYK9 610 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 WHAMMQ8TF30 809 aa15.45■□□□□ 0.06
SCARB2-208ENST00000638372 EMSYQ7Z589 1322 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 MCF2LO15068 1137 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 EYA4O95677 639 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 CLTAP09496 248 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 CASP7P55210 303 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 PTPAQ15257 358 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 HHIPL2Q6UWX4 724 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 EXOC8Q8IYI6 725 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 KCTD6Q8NC69 237 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 LRRC8CQ8TDW0 803 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 CCDC188H7C350 402 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 FTLP02792 175 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-208ENST00000638372 PDE1BQ01064 536 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 MTMR2Q13614 643 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 NR1I3Q14994 352 aa15.44■□□□□ 0.06
SCARB2-208ENST00000638372 EPHA7Q15375 998 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms