RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 CDK5RAP3Q96JB5 506 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 LBHD1Q9BQE6 289 aaPredicted RBP19.19■□□□□ 0.66
CLN6-218ENST00000637223 SUGCTQ9HAC7 445 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 CHMP5Q9NZZ3 219 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 RCOR1Q9UKL0 485 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 KDM3AQ9Y4C1 1321 aa19.19■□□□□ 0.66
CLN6-218ENST00000637223 SMIM35A0A1B0GVV1 85 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 E9PMD0 336 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 RBAK-RBAKDNI3L0D1 243 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 PITPNM1O00562 1244 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 SELPP16109 830 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 ME1P48163 572 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 RARRES1P49788 294 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 POLGP54098 1239 aaPredicted RBP19.18■□□□□ 0.66
CLN6-218ENST00000637223 RBL2Q08999 1139 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 TMEM62Q0P6H9 643 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 GRB10Q13322 594 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 KARSQ15046 597 aaKnown RBP19.18■□□□□ 0.66
CLN6-218ENST00000637223 MFSD5Q6N075 450 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 EFCAB12Q6NXP0 572 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 LRRC8DQ7L1W4 858 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 RSPH3Q86UC2 560 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 RASSF8Q8NHQ8 419 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 LEO1Q8WVC0 666 aaPredicted RBP19.18■□□□□ 0.66
CLN6-218ENST00000637223 SYMPKQ92797 1274 aaKnown RBP19.18■□□□□ 0.66
CLN6-218ENST00000637223 SPATA32Q96LK8 384 aa19.18■□□□□ 0.66
CLN6-218ENST00000637223 CUTAO60888 179 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 MAFO75444 373 aaPredicted RBP19.17■□□□□ 0.66
CLN6-218ENST00000637223 XRCC6P12956 609 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLN6-218ENST00000637223 TMEM119Q4V9L6 283 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 HYIQ5T013 277 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 TRAF7Q6Q0C0 670 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 KCNK18Q7Z418 384 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 KIAA0319LQ8IZA0 1049 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 LINC01465Q8N7H1 131 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 MAFAQ8NHW3 353 aaPredicted RBP19.17■□□□□ 0.66
CLN6-218ENST00000637223 SLC7A3Q8WY07 619 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 CALML4Q96GE6 196 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 PPP1R16BQ96T49 567 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 CDX2Q99626 313 aaPredicted RBP19.17■□□□□ 0.66
CLN6-218ENST00000637223 GDPD2Q9HCC8 539 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 DBR1Q9UK59 544 aaKnown RBP19.17■□□□□ 0.66
CLN6-218ENST00000637223 PCDHA7Q9UN72 937 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 DNM3Q9UQ16 869 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 PPME1Q9Y570 386 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
CLN6-218ENST00000637223 ARHGEF35A5YM69 484 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 RSPH10B2B2RC85 870 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 USO1O60763 962 aaKnown RBP19.16■□□□□ 0.66
CLN6-218ENST00000637223 VTNP04004 478 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 IQCF3P0C7M6 154 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 RSPH10BP0C881 870 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 CSF2RAP15509 400 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 TMOD1P28289 359 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 RFC5P40937 340 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 MKRN4PQ13434 485 aaPredicted RBP19.16■□□□□ 0.66
CLN6-218ENST00000637223 DRP2Q13474 957 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 EMC2Q15006 297 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 RPAINQ86UA6 219 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 TMEM199Q8N511 208 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 CCSER1Q9C0I3 900 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 NT5C3AQ9H0P0 336 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 BHMT2Q9H2M3 363 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 DHX33Q9H6R0 707 aaKnown RBP19.16■□□□□ 0.66
CLN6-218ENST00000637223 AKT3Q9Y243 479 aa19.16■□□□□ 0.66
CLN6-218ENST00000637223 IGKV6-21A0A0C4DH24 114 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 SLC26A4O43511 780 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 CAND2O75155 1236 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 EYA4O95677 639 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 PLCG1P19174 1290 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 TXLNAP40222 546 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 MRPS6P82932 125 aaKnown RBP19.15■□□□□ 0.66
CLN6-218ENST00000637223 FPGSQ05932 587 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 AXDND1Q5T1B0 1012 aaPredicted RBP19.15■□□□□ 0.66
CLN6-218ENST00000637223 TMEM143Q96AN5 459 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 MAP7D2Q96T17 732 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 JPH2Q9BR39 696 aaPredicted RBP19.15■□□□□ 0.66
CLN6-218ENST00000637223 SCAND2PQ9GZW5 306 aaPredicted RBP19.15■□□□□ 0.66
CLN6-218ENST00000637223 CDY2AQ9Y6F7 541 aa19.15■□□□□ 0.66
CLN6-218ENST00000637223 DGAT1O75907 488 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 CHRNA1P02708 482 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 SSBP05455 408 aaKnown RBP eCLIP19.14■□□□□ 0.65
CLN6-218ENST00000637223 MGAT3Q09327 533 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 MBTPS1Q14703 1052 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 SHC4Q6S5L8 630 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 PADI6Q6TGC4 694 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 MAEAQ7L5Y9 396 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 DEFB128Q7Z7B8 93 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 NME8Q8N427 588 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 LRRC15Q8TF66 581 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 ZNF668Q96K58 619 aaPredicted RBP19.14■□□□□ 0.65
CLN6-218ENST00000637223 MTRQ99707 1265 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 ATP6V0A4Q9HBG4 840 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 XPNPEP1Q9NQW7 623 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 SUCLA2Q9P2R7 463 aaPredicted RBP19.14■□□□□ 0.65
CLN6-218ENST00000637223 GINS2Q9Y248 185 aa19.14■□□□□ 0.65
CLN6-218ENST00000637223 MYH9P35579 1960 aaKnown RBP19.13■□□□□ 0.65
CLN6-218ENST00000637223 VCANP13611 3396 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 M0QZ92 97 aa19.13■□□□□ 0.65
CLN6-218ENST00000637223 RPLP2P05387 115 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms