RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 GCOM2Q9BZD3 368 aaPredicted RBP9.17□□□□□ -0.94
PNKP-226ENST00000636840 SUCLA2Q9P2R7 463 aaPredicted RBP9.17□□□□□ -0.94
PNKP-226ENST00000636840 MSRAQ9UJ68 235 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 CFAP45Q9UL16 551 aa9.17□□□□□ -0.94
PNKP-226ENST00000636840 TRIOBPQ9H2D6 2365 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 KDM3AQ9Y4C1 1321 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 ARHGEF35A5YM69 484 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 ZBTB42B2RXF5 422 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 NBNO60934 754 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 RPS6KA5O75582 802 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 STBD1O95210 358 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 CHRNA1P02708 482 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 AMHP03971 560 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 VTNP04004 478 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 SPATA31C1P0DKV0 1188 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 GHRP10912 638 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 ANP32AP39687 249 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 TXLNAP40222 546 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 CLCN3P51790 818 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 EPHB4P54760 987 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 NPEPPSP55786 919 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 NLRP11P59045 1033 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 CEBPZQ03701 1054 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 NCBP1Q09161 790 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 TMEM62Q0P6H9 643 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 NFX1Q12986 1120 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 RESTQ13127 1097 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 TFDP1Q14186 410 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 MXD4Q14582 209 aaPredicted RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 STK38Q15208 465 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 ZRSR1Q15695 479 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 PLEKHG4Q58EX7 1191 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 FBXO47Q5MNV8 452 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 C9orf50Q5SZB4 431 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 PLA2G4FQ68DD2 849 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 TSHZ1Q6ZSZ6 1077 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 LRRC71Q8N4P6 559 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 MCPH1Q8NEM0 835 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 PIGOQ8TEQ8 1089 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 NLRP7Q8WX94 980 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 PSPC1Q8WXF1 523 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 WNT8BQ93098 351 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 MTRQ99707 1265 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 CCDC39Q9UFE4 941 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 KCNG1Q9UIX4 513 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 DBR1Q9UK59 544 aaKnown RBP9.16□□□□□ -0.94
PNKP-226ENST00000636840 KIAA1024Q9UPX6 916 aa9.16□□□□□ -0.94
PNKP-226ENST00000636840 IGKV6-21A0A0C4DH24 114 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 MED24O75448 989 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 F13A1P00488 732 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 ATP2A2P16615 1042 aaKnown RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 ZSCAN20P17040 1043 aaPredicted RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 NUCB2P80303 420 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 SMAD3P84022 425 aaKnown RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 MGAT3Q09327 533 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 PAK2Q13177 524 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 RAB30Q15771 203 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 KIZQ2M2Z5 673 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 FOXD4L5Q5VV16 416 aaPredicted RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 TRAF7Q6Q0C0 670 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 CABP7Q86V35 215 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 ZNF410Q86VK4 478 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 RHPN2Q8IUC4 686 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 FOXD4L4Q8WXT5 416 aaPredicted RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 ZBTB10Q96DT7 871 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 SLC9A7Q96T83 725 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 SH2D3AQ9BRG2 576 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 DHX33Q9H6R0 707 aaKnown RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 ATP6V0A4Q9HBG4 840 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 DDX19AQ9NUU7 478 aaKnown RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 SRPRBQ9Y5M8 271 aaKnown RBP9.15□□□□□ -0.94
PNKP-226ENST00000636840 CLIC4Q9Y696 253 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 EVPLQ92817 2033 aa9.15□□□□□ -0.94
PNKP-226ENST00000636840 DENND3A2RUS2 1198 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 ZBTB39O15060 712 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 SPTLC2O15270 562 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 YEATS4O95619 227 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 EYA4O95677 639 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 STAG3L1P0CL83 205 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 EIF4BP23588 611 aaKnown RBP9.14□□□□□ -0.95
PNKP-226ENST00000636840 MARCKSP29966 332 aaPredicted RBP9.14□□□□□ -0.95
PNKP-226ENST00000636840 CD52P31358 61 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 RARRES1P49788 294 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 LPIN1Q14693 890 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 GPNMBQ14956 572 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 EMC2Q15006 297 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 PPP2R5AQ15172 486 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 RASIP1Q5U651 963 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 GPR153Q6NV75 609 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 SRGAP1Q7Z6B7 1085 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 KRI1Q8N9T8 703 aaKnown RBP9.14□□□□□ -0.95
PNKP-226ENST00000636840 PRPF31Q8WWY3 499 aaKnown RBP9.14□□□□□ -0.95
PNKP-226ENST00000636840 IFT74Q96LB3 600 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 USP28Q96RU2 1077 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 OSMRQ99650 979 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 WRAP73Q9P2S5 460 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms