RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 ZC3H12DA2A288 527 aaKnown RBP3.14□□□□□ -1.91
CD46-219ENST00000636114 ARVCFO00192 962 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 WNT9AO14904 365 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 PPP1R12AO14974 1030 aaPredicted RBP3.14□□□□□ -1.91
CD46-219ENST00000636114 FARP2O94887 1054 aaPredicted RBP3.14□□□□□ -1.91
CD46-219ENST00000636114 CRTAMO95727 393 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 GCP02774 474 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 GNAI2P04899 355 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 ATF3P18847 181 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 PTMSP20962 102 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 SRSF3P84103 164 aaKnown RBP3.14□□□□□ -1.91
CD46-219ENST00000636114 PRR5P85299 388 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 DCTN1Q14203 1278 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 HSP90AB4PQ58FF6 505 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 C1orf141Q5JVX7 400 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 SDE2Q6IQ49 451 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 OGFOD2Q6N063 350 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 BRAPQ7Z569 592 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 ZC3H7AQ8IWR0 971 aaKnown RBP3.14□□□□□ -1.91
CD46-219ENST00000636114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.14□□□□□ -1.91
CD46-219ENST00000636114 TSPAN17Q96FV3 270 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 FMNL2Q96PY5 1086 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 FEZ1Q99689 392 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 THUMPD2Q9BTF0 503 aaKnown RBP3.14□□□□□ -1.91
CD46-219ENST00000636114 MCOLN1Q9GZU1 580 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 RXFP1Q9HBX9 757 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 SIRT5Q9NXA8 310 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 PCDHA9Q9Y5H5 950 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 PCDHA8Q9Y5H6 950 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 OVOS2A0A0G2JMS6 1433 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 NCAPD2Q15021 1401 aa3.14□□□□□ -1.91
CD46-219ENST00000636114 PHRF1Q9P1Y6 1649 aaKnown RBP3.14□□□□□ -1.91
CD46-219ENST00000636114 PXDNLA1KZ92 1463 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 PIK3C2AO00443 1686 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 KRIT1O00522 736 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 MAFKO60675 156 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 RAB11FIP3O75154 756 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 RFPL3O75679 317 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 RASGRP1O95267 797 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 GNAT1P11488 350 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 ZNF200P98182 395 aaPredicted RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 SPIRE1Q08AE8 756 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 MESP2Q0VG99 397 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 TEFQ10587 303 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 EMC4Q5J8M3 183 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 VIRMAQ69YN4 1812 aaKnown RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 KIAA0907Q7Z7F0 614 aaPredicted RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 ARHGEF25Q86VW2 580 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 HSCBQ8IWL3 235 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 POU5F2Q8N7G0 328 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 CEMIPQ8WUJ3 1361 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 SNX21Q969T3 373 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 SCLYQ96I15 445 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 FAM84AQ96KN4 292 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 LMTK3Q96Q04 1460 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 JAM3Q9BX67 310 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 IPPKQ9H8X2 491 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 KCNK12Q9HB15 430 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 TRIM39Q9HCM9 518 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 TNNQ9UQP3 1299 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 CD2APQ9Y5K6 639 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 HCFC2Q9Y5Z7 792 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 DLG5Q8TDM6 1919 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 KIF1AQ12756 1690 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 NWD1Q149M9 1564 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 IBTKQ9P2D0 1353 aaPredicted RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 USP19O94966 1318 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 NPHP3Q7Z494 1330 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 HGSO14964 777 aaPredicted RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 GSTA4O15217 222 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 REC8O95072 547 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 DDX58O95786 925 aaKnown RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 HSP90AB1P08238 724 aaKnown RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 TKFCQ3LXA3 575 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 PLEKHG4Q58EX7 1191 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 FAM47CQ5HY64 1035 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 STEAP3Q658P3 488 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 CYP4F22Q6NT55 531 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 CEP85Q6P2H3 762 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 SYDE1Q6ZW31 735 aaPredicted RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 OTOP3Q7RTS5 596 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 KRT28Q7Z3Y7 464 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 FGD2Q7Z6J4 655 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 MILR1Q7Z6M3 343 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 PCDH19Q8TAB3 1148 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 PHOSPHO1Q8TCT1 267 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 CLUHP3Q96NS8 147 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 PPP1R16BQ96T49 567 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 SLC38A3Q99624 504 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 KCNJ15Q99712 375 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 SLC6A20Q9NP91 592 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 DBF4Q9UBU7 674 aaPredicted RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 MBD1Q9UIS9 605 aaPredicted RBP3.13□□□□□ -1.91
CD46-219ENST00000636114 PALD1Q9ULE6 856 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 PLAAQ9Y263 795 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 ZNF652Q9Y2D9 606 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 SIT1Q9Y3P8 196 aa3.13□□□□□ -1.91
CD46-219ENST00000636114 PEAK1Q9H792 1746 aa3.12□□□□□ -1.91
CD46-219ENST00000636114 SLIT3O75094 1523 aa3.12□□□□□ -1.91
CD46-219ENST00000636114 TCRBV16S1A1N1A0A5B0 115 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms