RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 APOBEC2Q9Y235 224 aaKnown RBP12.49□□□□□ -0.41
COL11A1-211ENST00000635193 ERCC6L2Q5T890 1561 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 IGKV5-2P06315 115 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 CAV1Q03135 178 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 SPICE1Q8N0Z3 855 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 DEPDC1BQ8WUY9 529 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 BHMT2Q9H2M3 363 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 IPO11Q9UI26 975 aaKnown RBP12.49□□□□□ -0.41
COL11A1-211ENST00000635193 TLK1Q9UKI8 766 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 LZTS1Q9Y250 596 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 KIF1BO60333 1816 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 A0A1B0GTH6 734 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 KCNA3P22001 575 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 EPHB1P54762 984 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 KCNH2Q12809 1159 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
COL11A1-211ENST00000635193 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 DCTN4Q9UJW0 460 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 LEMD3Q9Y2U8 911 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 XDHP47989 1333 aa12.49□□□□□ -0.41
COL11A1-211ENST00000635193 GPC5P78333 572 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 MRPS35P82673 323 aaKnown RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 LRRC14Q15048 493 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 ANKRD36BP1Q96IX9 119 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 MXD3Q9BW11 206 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 SLITRK6Q9H5Y7 841 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 CACYBPQ9HB71 228 aaKnown RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 SLC40A1Q9NP59 571 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 NOC2LQ9Y3T9 749 aaKnown RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 LAMC1P11047 1609 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 COPEO14579 308 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 ARFIP2P53365 341 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 RCAN1P53805 252 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 DNAAF3Q8N9W5 541 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 CALR3Q96L12 384 aaKnown RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 ABCA8O94911 1581 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 PALM3A6NDB9 673 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 POTEMA6NI47 508 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 PPP1R12AO14974 1030 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 GSTA4O15217 222 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 KRT37O76014 449 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 TJP3O95049 919 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 ZNF211Q13398 564 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 RASGRP2Q7LDG7 609 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 CCNYQ8ND76 341 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 RAD54LQ92698 747 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 TRPV6Q9H1D0 765 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 MID2Q9UJV3 735 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 ZNF185O15231 689 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 CHRNA3P32297 505 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 MECOMQ03112 1051 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 FSCBQ5H9T9 825 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 RAB44Q7Z6P3 723 aaPredicted RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 SH2D3CQ8N5H7 860 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
COL11A1-211ENST00000635193 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 NOD1Q9Y239 953 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 TSC22D4Q9Y3Q8 395 aa12.48□□□□□ -0.41
COL11A1-211ENST00000635193 HEG1Q9ULI3 1381 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 FAM187AA6NFU0 413 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 MED7O43513 233 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 SYF2O95926 243 aaKnown RBP12.47□□□□□ -0.41
COL11A1-211ENST00000635193 SRGAP2BP0DMP2 458 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 KCNA4P22459 653 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
COL11A1-211ENST00000635193 TMED10P49755 219 aaKnown RBP12.47□□□□□ -0.41
COL11A1-211ENST00000635193 ARL4CP56559 192 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 ALCAMQ13740 583 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 SPATA21Q7Z572 469 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 ING2Q9H160 280 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 EHD2Q9NZN4 543 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
COL11A1-211ENST00000635193 ARL2BPQ9Y2Y0 163 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 FIS1Q9Y3D6 152 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 PFDN6O15212 129 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 IRAK1P51617 712 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 CTTNQ14247 550 aaKnown RBP12.47□□□□□ -0.41
COL11A1-211ENST00000635193 LONP2Q86WA8 852 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 LIMA1Q9UHB6 759 aaKnown RBP12.47□□□□□ -0.41
COL11A1-211ENST00000635193 SERPINB13Q9UIV8 391 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 HPCAL4Q9UM19 191 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 NR3C1P04150 777 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 COASYQ13057 564 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 OLFML2BQ68BL8 750 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 RASSF3Q86WH2 238 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 CEP170P1Q96L14 293 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 TTC25Q96NG3 672 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 FAM96AQ9H5X1 160 aa12.47□□□□□ -0.41
COL11A1-211ENST00000635193 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms