RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 EBF1Q9UH73 591 aa6.43□□□□□ -1.38
TRAPPC9-216ENST00000634178 COMMD10Q9Y6G5 202 aa6.43□□□□□ -1.38
TRAPPC9-216ENST00000634178 C3P01024 1663 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 AGLP35573 1532 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 PRAMEF25A6NGN4 478 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 MAFGO15525 162 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 PRPF3O43395 683 aaKnown RBP6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 TGFB1P01137 390 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 C4BPAP04003 597 aaKnown RBP6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 PRNPP04156 253 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 CD8BP10966 210 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 PNLIPP16233 465 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 ENPP1P22413 925 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 HK2P52789 917 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 UGT8Q16880 541 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 ARHGAP29Q52LW3 1261 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 ESRP1Q6NXG1 681 aaKnown RBP6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 SLC23A3Q6PIS1 610 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 VSIG10LQ86VR7 867 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 SMC5Q8IY18 1101 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 EXOC8Q8IYI6 725 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 MIER2Q8N344 545 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 TTC17Q96AE7 1141 aa6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 RC3H2Q9HBD1 1191 aaKnown RBP6.42□□□□□ -1.38
TRAPPC9-216ENST00000634178 PLA2R1Q13018 1463 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 LOC102724159A0A0B4J2E5 919 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 UBA6A0AVT1 1052 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 FAM90A27PA6NNH2 459 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 SRGAP3O43295 1099 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PCDHGA12O60330 932 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 H2AFYO75367 372 aaKnown RBP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 MSL3P1P0C860 447 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 SLC5A3P53794 718 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 MRPS9P82933 396 aaKnown RBP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 SLC9A5Q14940 896 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PDCD1Q15116 288 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PWP2Q15269 919 aaKnown RBP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 TTC38Q5R3I4 469 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 CATSPEREQ5SY80 951 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 MILR1Q7Z6M3 343 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 CXorf67Q86X51 503 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 RSAD2Q8WXG1 361 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 RTF1Q92541 710 aaKnown RBP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 FERMT2Q96AC1 680 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 TEKT5Q96M29 485 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 C1orf112Q9NSG2 853 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 ASB1Q9Y576 335 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PCDHGA9Q9Y5G4 932 aaKnown RBP6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PCDHGA8Q9Y5G5 932 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PCDHGA7Q9Y5G6 932 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PCDHGA6Q9Y5G7 932 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PCDHGA3Q9Y5H0 932 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 PCDHGA2Q9Y5H1 932 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 GPR45Q9Y5Y3 372 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 NPATQ14207 1427 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 CNTLNQ9NXG0 1405 aa6.41□□□□□ -1.38
TRAPPC9-216ENST00000634178 SAMD9Q5K651 1589 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 ST20-MTHFSA0A0A6YYL1 179 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 OFD1O75665 1012 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 CYBBP04839 570 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 NBPF7P0C2Y1 421 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 AGXTP21549 392 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 LPOP22079 712 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 GDNFP39905 211 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 ADKP55263 362 aaKnown RBP6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 GBX1Q14549 363 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 ODF1Q14990 250 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 NR1I3Q14994 352 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 RRP12Q5JTH9 1297 aaKnown RBP6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 FSTL4Q6MZW2 842 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 PAQR3Q6TCH7 311 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 CMIPQ8IY22 773 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 ZNF496Q96IT1 587 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 PLCD4Q9BRC7 762 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 DBR1Q9UK59 544 aaKnown RBP6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 PALD1Q9ULE6 856 aa6.4□□□□□ -1.38
TRAPPC9-216ENST00000634178 NUP153P49790 1475 aaKnown RBP6.4□□□□□ -1.39
TRAPPC9-216ENST00000634178 KDM5CP41229 1560 aa6.4□□□□□ -1.39
TRAPPC9-216ENST00000634178 CAMSAP1Q5T5Y3 1602 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 TCRBV5S2A0A599 114 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 HPXP02790 462 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 TRIM27P14373 513 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 FUT4P22083 530 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 CD96P40200 585 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 MANFP55145 182 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 TMEM62Q0P6H9 643 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 SEC23AQ15436 765 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 LONRF3Q496Y0 759 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 PAN2Q504Q3 1202 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 IFIT1BQ5T764 474 aaKnown RBP6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 EPM2AIP1Q7L775 607 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 C11orf96Q7Z7L8 435 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 NLRX1Q86UT6 975 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 HIPK4Q8NE63 616 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 TGFBRAP1Q8WUH2 860 aa6.39□□□□□ -1.39
TRAPPC9-216ENST00000634178 CLEC4DQ8WXI8 215 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms