RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PLA2G4FQ68DD2 849 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 NCAPH2Q6IBW4 605 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 TMCO2Q7Z6W1 182 aaPredicted RBP12.47□□□□□ -0.41
DDX41-219ENST00000629036 C4orf19Q8IY42 314 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 CRIPAKQ8N1N5 446 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 DYDC2Q96IM9 177 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 EIF2AK1Q9BQI3 630 aaKnown RBP12.47□□□□□ -0.41
DDX41-219ENST00000629036 SH2D3AQ9BRG2 576 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 C1QTNF1Q9BXJ1 281 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 ADAMTS10Q9H324 1103 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 TCEAL9Q9UHQ7 104 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 PCDHA12Q9UN75 941 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 HCN4Q9Y3Q4 1203 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 TRPV2Q9Y5S1 764 aa12.47□□□□□ -0.41
DDX41-219ENST00000629036 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 ABHD14A-ACY1A0A1B0GW23 586 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 RPLP2P05387 115 aaKnown RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 MYOGP15173 224 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 ATP2B1P20020 1258 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 TXKP42681 527 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDX41-219ENST00000629036 RABGGTBP53611 331 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 NPEPPSP55786 919 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 CYP4A11Q02928 519 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 CTTNQ14247 550 aaKnown RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDX41-219ENST00000629036 TSHZ1Q6ZSZ6 1077 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 TRMT1LQ7Z2T5 733 aaKnown RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 CKAP2LQ8IYA6 745 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 NME8Q8N427 588 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 LRRC71Q8N4P6 559 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 SLC9A7Q96T83 725 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 IFIH1Q9BYX4 1025 aaKnown RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 CELF4Q9BZC1 486 aaKnown RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 FTOQ9C0B1 505 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDX41-219ENST00000629036 TMX1Q9H3N1 280 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 DHX33Q9H6R0 707 aaKnown RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
DDX41-219ENST00000629036 CEP131Q9UPN4 1083 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 KIF3AQ9Y496 699 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 SLC4A7Q9Y6M7 1214 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 SQORQ9Y6N5 450 aa12.46□□□□□ -0.41
DDX41-219ENST00000629036 MUC6Q6W4X9 2439 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 MAGEB2O15479 319 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 MAFO75444 373 aaPredicted RBP12.45□□□□□ -0.42
DDX41-219ENST00000629036 MED24O75448 989 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 VTNP04004 478 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 ACTN1P12814 892 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 ATP2A2P16615 1042 aaKnown RBP12.45□□□□□ -0.42
DDX41-219ENST00000629036 SYT1P21579 422 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
DDX41-219ENST00000629036 RESTQ13127 1097 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 PTGDRQ13258 359 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 ECM1Q16610 540 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 MTERF2Q49AM1 385 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
DDX41-219ENST00000629036 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 RTN4RL1Q86UN2 441 aaPredicted RBP12.45□□□□□ -0.42
DDX41-219ENST00000629036 HERC6Q8IVU3 1022 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 IGSF22Q8N9C0 903 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 PHOSPHO2Q8TCD6 241 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
DDX41-219ENST00000629036 LRFN3Q9BTN0 628 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 RC3H2Q9HBD1 1191 aaKnown RBP12.45□□□□□ -0.42
DDX41-219ENST00000629036 ERVK-5Q9HDB9 667 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 XPNPEP1Q9NQW7 623 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 CYP26B1Q9NR63 512 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 MTMR6Q9Y217 621 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 MYO7AQ13402 2215 aa12.45□□□□□ -0.42
DDX41-219ENST00000629036 PLXNA4Q9HCM2 1894 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 LCHNA4D1U4 455 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 ZBBXA8MT70 800 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 MGEA5O60502 916 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
DDX41-219ENST00000629036 CD52P31358 61 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 GPC3P51654 580 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 ADGRE1Q14246 886 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 KIZQ2M2Z5 673 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 RILPL1Q5EBL4 403 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 EFCAB12Q6NXP0 572 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 RSPH3Q86UC2 560 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 FAM228AQ86W67 206 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 CATSPER3Q86XQ3 398 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 MICALL1Q8N3F8 863 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 MMTAG2Q9BU76 263 aaKnown RBP12.44□□□□□ -0.42
DDX41-219ENST00000629036 MTIF3Q9H2K0 278 aaKnown RBP12.44□□□□□ -0.42
DDX41-219ENST00000629036 EPHX3Q9H6B9 360 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 ZSWIM4Q9H7M6 989 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 NRBP2Q9NSY0 501 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 NOL7Q9UMY1 257 aaKnown RBP12.44□□□□□ -0.42
DDX41-219ENST00000629036 NOC2LQ9Y3T9 749 aaKnown RBP12.44□□□□□ -0.42
DDX41-219ENST00000629036 PCDHA11Q9Y5I1 949 aa12.44□□□□□ -0.42
DDX41-219ENST00000629036 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 PP2D1A8MPX8 630 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 EFCAB14O75071 495 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 GJB5O95377 273 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 LINC00271P0C7V0 271 aa12.43□□□□□ -0.42
DDX41-219ENST00000629036 YWHABP31946 246 aaKnown RBP12.43□□□□□ -0.42
DDX41-219ENST00000629036 PRPHP41219 470 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms