RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CASP4P49662 377 aa24.2■■□□□ 1.47
PNKP-220ENST00000627232 TREML2Q5T2D2 321 aa24.2■■□□□ 1.47
PNKP-220ENST00000627232 SFMBT2Q5VUG0 894 aa24.2■■□□□ 1.47
PNKP-220ENST00000627232 ZC3H15Q8WU90 426 aaKnown RBP24.2■■□□□ 1.47
PNKP-220ENST00000627232 TMEM174Q8WUU8 243 aa24.2■■□□□ 1.47
PNKP-220ENST00000627232 JAKMIP2Q96AA8 810 aa24.2■■□□□ 1.47
PNKP-220ENST00000627232 L3MBTL3Q96JM7 780 aaPredicted RBP24.2■■□□□ 1.47
PNKP-220ENST00000627232 TSGA10Q9BZW7 698 aa24.2■■□□□ 1.47
PNKP-220ENST00000627232 PFASO15067 1338 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 A0A0G2JLL6 359 aaPredicted RBP24.2■■□□□ 1.46
PNKP-220ENST00000627232 SPATA31C2B4DYI2 1134 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 RGS20O76081 388 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 ABL1P00519 1130 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 YBX3P16989 372 aaKnown RBP eCLIP24.2■■□□□ 1.46
PNKP-220ENST00000627232 NF2P35240 595 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 EIF4A3P38919 411 aaKnown RBP24.2■■□□□ 1.46
PNKP-220ENST00000627232 VAV2P52735 878 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 NAA30Q147X3 362 aaPredicted RBP24.2■■□□□ 1.46
PNKP-220ENST00000627232 PRRT2Q7Z6L0 340 aaPredicted RBP24.2■■□□□ 1.46
PNKP-220ENST00000627232 ERO1BQ86YB8 467 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 FAM186BQ8IYM0 893 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 SLC35C1Q96A29 364 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 NAPGQ99747 312 aaPredicted RBP24.2■■□□□ 1.46
PNKP-220ENST00000627232 TMEM206Q9H813 350 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 AGPAT3Q9NRZ7 376 aa24.2■■□□□ 1.46
PNKP-220ENST00000627232 K7ENM7 598 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 CXCL11O14625 94 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 USO1O60763 962 aaKnown RBP24.19■■□□□ 1.46
PNKP-220ENST00000627232 KIF11P52732 1056 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 POLR2FP61218 127 aaKnown RBP24.19■■□□□ 1.46
PNKP-220ENST00000627232 SNRPFP62306 86 aaKnown RBP24.19■■□□□ 1.46
PNKP-220ENST00000627232 CCDC122Q5T0U0 273 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 DPY19L2Q6NUT2 758 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 DLK2Q6UY11 383 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 ANKRD13AQ8IZ07 590 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 CARD6Q9BX69 1037 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 FBXL5Q9UKA1 691 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 MYO6Q9UM54 1294 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 GUCA1BQ9UMX6 200 aa24.19■■□□□ 1.46
PNKP-220ENST00000627232 DOCK5Q9H7D0 1870 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 EFCAB8A8MWE9 144 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 BACH1O14867 736 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 TADA3O75528 432 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 SERPING1P05155 500 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 PSAPP07602 524 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 PLEKP08567 350 aaPredicted RBP24.18■■□□□ 1.46
PNKP-220ENST00000627232 ICAM3P32942 547 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 SLC9C1Q4G0N8 1177 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 XKR9Q5GH70 373 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 DPY19L2P1Q6NXN4 242 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 OTUD6AQ7L8S5 288 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 SYCP3Q8IZU3 236 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 ATP6V0A1Q93050 837 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 ACCSQ96QU6 501 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 CRACR2AQ9BSW2 395 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 DEF6Q9H4E7 631 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 NLRC4Q9NPP4 1024 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 CDC23Q9UJX2 597 aa24.18■■□□□ 1.46
PNKP-220ENST00000627232 STXBP2Q15833 593 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 EXOC3L4Q17RC7 722 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 ASTE1Q2TB18 679 aaPredicted RBP24.17■■□□□ 1.46
PNKP-220ENST00000627232 DCAF17Q5H9S7 520 aaPredicted RBP24.17■■□□□ 1.46
PNKP-220ENST00000627232 HGSNATQ68CP4 663 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 GBP6Q6ZN66 633 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 C12orf56Q8IXR9 622 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 TXLNBQ8N3L3 684 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 PDCL3Q9H2J4 239 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 JPH1Q9HDC5 661 aaPredicted RBP24.17■■□□□ 1.46
PNKP-220ENST00000627232 AIPL1Q9NZN9 384 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 SLC9A2Q9UBY0 812 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 FRMD4BQ9Y2L6 1034 aa24.17■■□□□ 1.46
PNKP-220ENST00000627232 SPDYE5A6NIY4 337 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 IRF6O14896 467 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 AKR1B10O60218 316 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 GTF2BQ00403 316 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 PPP2R5AQ15172 486 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 GADL1Q6ZQY3 521 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 KSR1Q8IVT5 923 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 PDCL2Q8N4E4 241 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 LRRN4CLQ8ND94 238 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 CNKSR2Q8WXI2 1034 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 CDCA5Q96FF9 252 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 ELP3Q9H9T3 547 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 BTBD7Q9P203 1132 aa24.16■■□□□ 1.46
PNKP-220ENST00000627232 RBAK-RBAKDNI3L0D1 243 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 ZNF263O14978 683 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 EIF3JO75822 258 aaKnown RBP24.15■■□□□ 1.46
PNKP-220ENST00000627232 PON1P27169 355 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 NCKAP1LP55160 1127 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 KIF5AQ12840 1032 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 ELF2Q15723 593 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 KLHDC7AQ5VTJ3 777 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 TCERG1LQ5VWI1 586 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 ANKRD35Q8N283 1001 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 HVCN1Q96D96 273 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 GABBR1Q9UBS5 961 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 TRIM10Q9UDY6 481 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.15■■□□□ 1.46
PNKP-220ENST00000627232 KCNH4Q9UQ05 1017 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 PCDHA13Q9Y5I0 950 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms