RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 TMEM154Q6P9G4 183 aa16.42■□□□□ 0.22
PMS1-221ENST00000624204 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
PMS1-221ENST00000624204 VSIG1Q86XK7 387 aa16.42■□□□□ 0.22
PMS1-221ENST00000624204 RIOK1Q9BRS2 568 aaKnown RBP16.42■□□□□ 0.22
PMS1-221ENST00000624204 STMN4Q9H169 189 aaPredicted RBP16.42■□□□□ 0.22
PMS1-221ENST00000624204 KLHL14Q9P2G3 628 aa16.42■□□□□ 0.22
PMS1-221ENST00000624204 C2CD2Q9Y426 696 aa16.42■□□□□ 0.22
PMS1-221ENST00000624204 RGPD5Q99666 1765 aa16.42■□□□□ 0.22
PMS1-221ENST00000624204 TNS3Q68CZ2 1445 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 NT5DC3Q86UY8 548 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 JAMLQ86YT9 394 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
PMS1-221ENST00000624204 GALNTL6Q49A17 601 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 NEK8Q86SG6 692 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 VPS36Q86VN1 386 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 SYCE1Q8N0S2 351 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 TMEM237Q96Q45 408 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 RPS6KC1Q96S38 1066 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 ZDHHC18Q9NUE0 388 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 DLGAP2Q9P1A6 1054 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 MTRF1LQ9UGC7 380 aaKnown RBP16.41■□□□□ 0.22
PMS1-221ENST00000624204 TFAP4Q01664 338 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 ROR2Q01974 943 aaKnown RBP16.41■□□□□ 0.22
PMS1-221ENST00000624204 LAMB3Q13751 1172 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 FAM26FQ5R3K3 315 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 CCDC24Q8N4L8 307 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
PMS1-221ENST00000624204 FGFBP2Q9BYJ0 223 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 TXLNGYQ9BZA5 131 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 SH3GLB2Q9NR46 395 aa16.41■□□□□ 0.22
PMS1-221ENST00000624204 SUCLA2Q9P2R7 463 aaPredicted RBP16.41■□□□□ 0.22
PMS1-221ENST00000624204 MYH4Q9Y623 1939 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 PLCG2P16885 1265 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 KLRC3Q07444 240 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 GRIPAP1Q4V328 841 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 DUPD1Q68J44 220 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 ZNF449Q6P9G9 518 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 KCNK18Q7Z418 384 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 COL23A1Q86Y22 540 aaPredicted RBP16.4■□□□□ 0.22
PMS1-221ENST00000624204 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 SEC14L1Q92503 715 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 NUDT12Q9BQG2 462 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 SYT15Q9BQS2 421 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 TRIM4Q9C037 500 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 RXFP1Q9HBX9 757 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 RASAL2Q9UJF2 1139 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 BHMG1C9JSJ3 638 aaPredicted RBP16.4■□□□□ 0.22
PMS1-221ENST00000624204 M0R2N6 131 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 RTN3O95197 1032 aaPredicted RBP16.4■□□□□ 0.22
PMS1-221ENST00000624204 ACSL3O95573 720 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 ADAM9Q13443 819 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 UBE4AQ14139 1066 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 COBLL1Q53SF7 1204 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 GJB7Q6PEY0 223 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 INTS8Q75QN2 995 aaKnown RBP16.4■□□□□ 0.22
PMS1-221ENST00000624204 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 EXOC3L1Q86VI1 746 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 RASGEF1CQ8N431 466 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 C18orf8Q96DM3 657 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 NUDCD1Q96RS6 583 aa16.4■□□□□ 0.22
PMS1-221ENST00000624204 SMCO2A6NFE2 343 aa16.39■□□□□ 0.22
PMS1-221ENST00000624204 PTENP60484 403 aa16.39■□□□□ 0.22
PMS1-221ENST00000624204 COASYQ13057 564 aa16.39■□□□□ 0.22
PMS1-221ENST00000624204 AUHQ13825 339 aaKnown RBP16.39■□□□□ 0.22
PMS1-221ENST00000624204 PPP1R15BQ5SWA1 713 aa16.39■□□□□ 0.22
PMS1-221ENST00000624204 C10orf76Q5T2E6 689 aa16.39■□□□□ 0.22
PMS1-221ENST00000624204 PROM2Q8N271 834 aa16.39■□□□□ 0.22
PMS1-221ENST00000624204 PNMA5Q96PV4 448 aa16.39■□□□□ 0.22
PMS1-221ENST00000624204 RAB3IPQ96QF0 476 aaPredicted RBP16.39■□□□□ 0.22
PMS1-221ENST00000624204 RPTORQ8N122 1335 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 NPHP3-ACAD11A0A0J9YXS1 232 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 USP17L3A6NCW0 530 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 USP17L4A6NCW7 530 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 GH1P01241 217 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 UCHL3P15374 230 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 YY1P25490 414 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 RFC5P40937 340 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 MRPS35P82673 323 aaKnown RBP16.39■□□□□ 0.21
PMS1-221ENST00000624204 PDCD2Q16342 344 aaPredicted RBP16.39■□□□□ 0.21
PMS1-221ENST00000624204 CALCRLQ16602 461 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 RNF220Q5VTB9 566 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 RFX8Q6ZV50 586 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 USP17L1Q7RTZ2 530 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 TRIM59Q8IWR1 403 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 GANQ9H2C0 597 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 PPP1R9AQ9ULJ8 1098 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 CYTH3O43739 400 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 PYGLP06737 847 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 STX2P32856 288 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 RANBP1P43487 201 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 POU5F1Q01860 360 aaKnown RBP16.39■□□□□ 0.21
PMS1-221ENST00000624204 MUM1Q2TAK8 710 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 KRT79Q5XKE5 535 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms