RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 NEMFO60524 1076 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 MAFO75444 373 aaPredicted RBP13.96□□□□□ -0.17
LINC00963-217ENST00000624009 LYPLA2O95372 231 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 U2AF2P26368 475 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC00963-217ENST00000624009 CD52P31358 61 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 CALCRLQ16602 461 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 ZBTB10Q96DT7 871 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 ZSWIM4Q9H7M6 989 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 RC3H2Q9HBD1 1191 aaKnown RBP13.96□□□□□ -0.17
LINC00963-217ENST00000624009 C1orf112Q9NSG2 853 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 PCDHA12Q9UN75 941 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 RWDD3Q9Y3V2 267 aa13.96□□□□□ -0.17
LINC00963-217ENST00000624009 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
LINC00963-217ENST00000624009 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 RPS6KA5O75582 802 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 STAG3L1P0CL83 205 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 EIF4BP23588 611 aaKnown RBP13.95□□□□□ -0.18
LINC00963-217ENST00000624009 RFC5P40937 340 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 DNM2P50570 870 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 ADGRE1Q14246 886 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 ANO5Q75V66 913 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 OTUD6AQ7L8S5 288 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 NPAS4Q8IUM7 802 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 NOSTRINQ8IVI9 506 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 SLC17A8Q8NDX2 589 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 TMX3Q96JJ7 454 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 YME1L1Q96TA2 773 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 ADAMTS10Q9H324 1103 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 ERVK-5Q9HDB9 667 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 CYP26B1Q9NR63 512 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 SEPT9Q9UHD8 586 aaPredicted RBP13.95□□□□□ -0.18
LINC00963-217ENST00000624009 AKT3Q9Y243 479 aa13.95□□□□□ -0.18
LINC00963-217ENST00000624009 LCHNA4D1U4 455 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 XIRP2A4UGR9 3374 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
LINC00963-217ENST00000624009 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00963-217ENST00000624009 TMEM62Q0P6H9 643 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
LINC00963-217ENST00000624009 ZNF410Q86VK4 478 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 BANK1Q8NDB2 785 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 TMEM40Q8WWA1 233 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 RSPH1Q8WYR4 309 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 ZNF689Q96CS4 500 aaPredicted RBP13.94□□□□□ -0.18
LINC00963-217ENST00000624009 LXNQ9BS40 222 aa13.94□□□□□ -0.18
LINC00963-217ENST00000624009 TTC12Q9H892 705 aaPredicted RBP13.94□□□□□ -0.18
LINC00963-217ENST00000624009 NOC2LQ9Y3T9 749 aaKnown RBP13.94□□□□□ -0.18
LINC00963-217ENST00000624009 MUC3AQ02505 3323 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 C5orf67F2Z3F1 127 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 LPXNO60711 386 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 DTNBO60941 627 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 DGKIO75912 1065 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 ARHGEF15O94989 841 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 VTNP04004 478 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 MUTP22033 750 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 YWHABP31946 246 aaKnown RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 SARSP49591 514 aaKnown RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 GPC3P51654 580 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 CLCN3P51790 818 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 NLRP11P59045 1033 aaKnown RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 KIZQ2M2Z5 673 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 MTERF2Q49AM1 385 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 SLC24A5Q71RS6 500 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 RTN4RL1Q86UN2 441 aaPredicted RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 LINC01599Q8WXQ3 324 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 SLC7A3Q8WY07 619 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 CLP1Q92989 425 aaKnown RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 BACH2Q9BYV9 841 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 INO80BQ9C086 356 aaPredicted RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 TMX1Q9H3N1 280 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 ELAC1Q9H777 363 aaKnown RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 SUGCTQ9HAC7 445 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 RGS18Q9NS28 235 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 NOL7Q9UMY1 257 aaKnown RBP13.93□□□□□ -0.18
LINC00963-217ENST00000624009 ST3GAL5Q9UNP4 418 aa13.93□□□□□ -0.18
LINC00963-217ENST00000624009 ADGRA3Q8IWK6 1321 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 KIAA1671Q9BY89 1806 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 LAD1O00515 517 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 SLITRK3O94933 977 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 RB1P06400 928 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 DARSP14868 501 aaKnown RBP13.92□□□□□ -0.18
LINC00963-217ENST00000624009 FAM189BP81408 668 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 GNL2Q13823 731 aaKnown RBP13.92□□□□□ -0.18
LINC00963-217ENST00000624009 PCBP1Q15365 356 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC00963-217ENST00000624009 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 FAM117BQ6P1L5 589 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
LINC00963-217ENST00000624009 FAM228AQ86W67 206 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■□ 21.4
LINC00963-217ENST00000624009 CMTR2Q8IYT2 770 aaKnown RBP13.92□□□□□ -0.18
LINC00963-217ENST00000624009 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 OSMRQ99650 979 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 TRAIPQ9BWF2 469 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 PLVAPQ9BX97 442 aa13.92□□□□□ -0.18
LINC00963-217ENST00000624009 GCOM2Q9BZD3 368 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms