RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 ADAMTS19Q8TE59 1207 aa14.68□□□□□ -0.06
ATRX-208ENST00000622960 NLRP7Q8WX94 980 aa14.68□□□□□ -0.06
ATRX-208ENST00000622960 GJA10Q969M2 543 aa14.68□□□□□ -0.06
ATRX-208ENST00000622960 PPP2R3CQ969Q6 453 aa14.68□□□□□ -0.06
ATRX-208ENST00000622960 MBOAT7Q96N66 472 aa14.68□□□□□ -0.06
ATRX-208ENST00000622960 UPF2Q9HAU5 1272 aaKnown RBP14.68□□□□□ -0.06
ATRX-208ENST00000622960 ERVK-5Q9HDB9 667 aa14.68□□□□□ -0.06
ATRX-208ENST00000622960 ST3GAL5Q9UNP4 418 aa14.68□□□□□ -0.06
ATRX-208ENST00000622960 NOC2LQ9Y3T9 749 aaKnown RBP14.68□□□□□ -0.06
ATRX-208ENST00000622960 DDX11L8A8MPP1 907 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 SLC37A4O43826 429 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 ZNF862O60290 1169 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 DGKIO75912 1065 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 BMPR1AP36894 532 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 PPP2R5CQ13362 524 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 GNL2Q13823 731 aaKnown RBP14.67□□□□□ -0.06
ATRX-208ENST00000622960 UGCGQ16739 394 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 PAN2Q504Q3 1202 aaKnown RBP14.67□□□□□ -0.06
ATRX-208ENST00000622960 SLC24A5Q71RS6 500 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 LRRC71Q8N4P6 559 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 BANK1Q8NDB2 785 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 NSUN7Q8NE18 718 aaKnown RBP14.67□□□□□ -0.06
ATRX-208ENST00000622960 SLC7A3Q8WY07 619 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 CCDC43Q96MW1 224 aaKnown RBP14.67□□□□□ -0.06
ATRX-208ENST00000622960 UHRF1Q96T88 793 aaPredicted RBP14.67□□□□□ -0.06
ATRX-208ENST00000622960 ADAM2Q99965 735 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 PLVAPQ9BX97 442 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 LMAN2LQ9H0V9 348 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 AAASQ9NRG9 546 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 LIMCH1Q9UPQ0 1083 aa14.67□□□□□ -0.06
ATRX-208ENST00000622960 LOXHD1Q8IVV2 1947 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 TNFRSF10AO00220 468 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 HOXA2O43364 376 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 CTDNEP1O95476 244 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 MMP1P03956 469 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 QARSP47897 775 aaKnown RBP14.66□□□□□ -0.06
ATRX-208ENST00000622960 FOSBP53539 338 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 TFF2Q03403 129 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 NCAPH2Q6IBW4 605 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 DIS3L2Q8IYB7 885 aaKnown RBP14.66□□□□□ -0.06
ATRX-208ENST00000622960 ABI1Q8IZP0 508 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 OXER1Q8TDS5 423 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 LINC01599Q8WXQ3 324 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 ZNF689Q96CS4 500 aaPredicted RBP14.66□□□□□ -0.06
ATRX-208ENST00000622960 GCOM2Q9BZD3 368 aaPredicted RBP14.66□□□□□ -0.06
ATRX-208ENST00000622960 INO80BQ9C086 356 aaPredicted RBP14.66□□□□□ -0.06
ATRX-208ENST00000622960 NSUN3Q9H649 340 aaKnown RBP14.66□□□□□ -0.06
ATRX-208ENST00000622960 ATP6V0A4Q9HBG4 840 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 KCNMB3Q9NPA1 279 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 RGS18Q9NS28 235 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 PPME1Q9Y570 386 aa14.66□□□□□ -0.06
ATRX-208ENST00000622960 EVPLQ92817 2033 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 C5orf67F2Z3F1 127 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 GPR32O75388 356 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 LARGE1O95461 756 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 P4HBP07237 508 aaKnown RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 SFPQP23246 707 aaKnown RBP eCLIP14.65□□□□□ -0.06
ATRX-208ENST00000622960 EIF4BP23588 611 aaKnown RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 GPC3P51654 580 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 POLGP54098 1239 aaPredicted RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 NAALADL2Q58DX5 795 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 EP400NLQ6ZTU2 488 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 OTUD6AQ7L8S5 288 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 FAM228AQ86W67 206 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 FAM184AQ8NB25 1140 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 TMEM40Q8WWA1 233 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 CLP1Q92989 425 aaKnown RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 P2RX5Q93086 422 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 ZSCAN31Q96LW9 406 aaPredicted RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 NIFKQ9BYG3 293 aaKnown RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 RC3H2Q9HBD1 1191 aaKnown RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 SH2B1Q9NRF2 756 aaPredicted RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 GJB4Q9NTQ9 266 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 DACT1Q9NYF0 836 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 PCDHB12Q9Y5F1 795 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 PRRC2BQ5JSZ5 2229 aaKnown RBP14.65□□□□□ -0.06
ATRX-208ENST00000622960 UNC80Q8N2C7 3258 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 TTC3P53804 2025 aa14.65□□□□□ -0.06
ATRX-208ENST00000622960 WDR81Q562E7 1941 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 NCK2O43639 380 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 EDIL3O43854 480 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 NEMFO60524 1076 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 HMGN5P82970 282 aaKnown RBP14.64□□□□□ -0.07
ATRX-208ENST00000622960 NR5A1Q13285 461 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 CALCRLQ16602 461 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 B3GNT9Q6UX72 402 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 ZNF410Q86VK4 478 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
ATRX-208ENST00000622960 LXNQ9BS40 222 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 ELAC1Q9H777 363 aaKnown RBP14.64□□□□□ -0.07
ATRX-208ENST00000622960 UBE2ZQ9H832 354 aaPredicted RBP14.64□□□□□ -0.07
ATRX-208ENST00000622960 TMEM161AQ9NX61 479 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 FAM50BQ9Y247 325 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 KIF3AQ9Y496 699 aa14.64□□□□□ -0.07
ATRX-208ENST00000622960 MRPL42Q9Y6G3 142 aaKnown RBP14.64□□□□□ -0.07
ATRX-208ENST00000622960 TBKBP1A7MCY6 615 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms