RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 DENND3A2RUS2 1198 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 DDX11L8A8MPP1 907 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 TNFRSF10AO00220 468 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 MGEA5O60502 916 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 XKR3Q5GH77 459 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 PPP4R3AQ6IN85 833 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 LINC01465Q8N7H1 131 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 CLP1Q92989 425 aaKnown RBP23.09■■□□□ 1.29
SMC6-210ENST00000621152 GTF3C6Q969F1 213 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 FAM20AQ96MK3 541 aa23.09■■□□□ 1.29
SMC6-210ENST00000621152 UHRF1Q96T88 793 aaPredicted RBP23.09■■□□□ 1.29
SMC6-210ENST00000621152 NIFKQ9BYG3 293 aaKnown RBP23.09■■□□□ 1.29
SMC6-210ENST00000621152 C5orf67F2Z3F1 127 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 MARCH6O60337 910 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 CCNT1O60563 726 aaKnown RBP23.08■■□□□ 1.29
SMC6-210ENST00000621152 LINC00271P0C7V0 271 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 SARSP49591 514 aaKnown RBP23.08■■□□□ 1.29
SMC6-210ENST00000621152 TBC1D8BQ0IIM8 1120 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 TARBP2Q15633 366 aaKnown RBP23.08■■□□□ 1.29
SMC6-210ENST00000621152 MTERF2Q49AM1 385 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 PAN2Q504Q3 1202 aaKnown RBP23.08■■□□□ 1.29
SMC6-210ENST00000621152 FAM228AQ86W67 206 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 CMTR2Q8IYT2 770 aaKnown RBP23.08■■□□□ 1.29
SMC6-210ENST00000621152 BANK1Q8NDB2 785 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 ZNF668Q96K58 619 aaPredicted RBP23.08■■□□□ 1.29
SMC6-210ENST00000621152 ADAMTS10Q9H324 1103 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 RGS18Q9NS28 235 aa23.08■■□□□ 1.29
SMC6-210ENST00000621152 SEPT9Q9UHD8 586 aaPredicted RBP23.08■■□□□ 1.29
SMC6-210ENST00000621152 TTC3P53804 2025 aa23.08■■□□□ 1.28
SMC6-210ENST00000621152 MYH9P35579 1960 aaKnown RBP23.07■■□□□ 1.28
SMC6-210ENST00000621152 EML1O00423 815 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 STBD1O95210 358 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 GCFC2P16383 781 aaKnown RBP23.07■■□□□ 1.28
SMC6-210ENST00000621152 KRT2P35908 639 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 GATMP50440 423 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 EARS2Q5JPH6 523 aaKnown RBP23.07■■□□□ 1.28
SMC6-210ENST00000621152 SLC24A5Q71RS6 500 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 ZNF710Q8N1W2 664 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 NECAB3Q96P71 396 aaPredicted RBP23.07■■□□□ 1.28
SMC6-210ENST00000621152 NAP1L4Q99733 375 aaKnown RBP23.07■■□□□ 1.28
SMC6-210ENST00000621152 C11orf84Q9BUA3 381 aaPredicted RBP23.07■■□□□ 1.28
SMC6-210ENST00000621152 KCNMB3Q9NPA1 279 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 C1orf112Q9NSG2 853 aa23.07■■□□□ 1.28
SMC6-210ENST00000621152 MRPL42Q9Y6G3 142 aaKnown RBP23.07■■□□□ 1.28
SMC6-210ENST00000621152 COL4A4P53420 1690 aaPredicted RBP23.06■■□□□ 1.28
SMC6-210ENST00000621152 EVPLQ92817 2033 aa23.06■■□□□ 1.28
SMC6-210ENST00000621152 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.06■■□□□ 1.28
SMC6-210ENST00000621152 TMEM150BA6NC51 233 aa23.06■■□□□ 1.28
SMC6-210ENST00000621152 GRM6O15303 877 aa23.06■■□□□ 1.28
SMC6-210ENST00000621152 EIF4BP23588 611 aaKnown RBP23.06■■□□□ 1.28
SMC6-210ENST00000621152 PSMC5P62195 406 aa23.06■■□□□ 1.28
SMC6-210ENST00000621152 NR5A1Q13285 461 aa23.06■■□□□ 1.28
SMC6-210ENST00000621152 NSUN7Q8NE18 718 aaKnown RBP23.06■■□□□ 1.28
SMC6-210ENST00000621152 SH2D3AQ9BRG2 576 aa23.06■■□□□ 1.28
SMC6-210ENST00000621152 BRMS1Q9HCU9 246 aa23.06■■□□□ 1.28
SMC6-210ENST00000621152 RNF216Q9NWF9 866 aaPredicted RBP23.06■■□□□ 1.28
SMC6-210ENST00000621152 C9IYK1 514 aa23.05■■□□□ 1.28
SMC6-210ENST00000621152 FAM189BP81408 668 aa23.05■■□□□ 1.28
SMC6-210ENST00000621152 PPP2R5CQ13362 524 aa23.05■■□□□ 1.28
SMC6-210ENST00000621152 TIGD5Q53EQ6 642 aa23.05■■□□□ 1.28
SMC6-210ENST00000621152 HAS1Q92839 578 aa23.05■■□□□ 1.28
SMC6-210ENST00000621152 PLVAPQ9BX97 442 aa23.05■■□□□ 1.28
SMC6-210ENST00000621152 UBE2ZQ9H832 354 aaPredicted RBP23.05■■□□□ 1.28
SMC6-210ENST00000621152 TRANK1O15050 2925 aa23.05■■□□□ 1.28
SMC6-210ENST00000621152 LOXHD1Q8IVV2 1947 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 COL4A6Q14031 1691 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 FAM205CA6NFA0 338 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 JAK2O60674 1132 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 DNM2P50570 870 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 GPC3P51654 580 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 FOSBP53539 338 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 DSC3Q14574 896 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 TCEAL5Q5H9L2 206 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 FAM102BQ5T8I3 360 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 SCLT1Q96NL6 688 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 CEP89Q96ST8 783 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 LMAN2LQ9H0V9 348 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 NSUN3Q9H649 340 aaKnown RBP23.04■■□□□ 1.28
SMC6-210ENST00000621152 ALG13Q9NP73 1137 aaKnown RBP23.04■■□□□ 1.28
SMC6-210ENST00000621152 VAV3Q9UKW4 847 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 PLAGL2Q9UPG8 496 aa23.04■■□□□ 1.28
SMC6-210ENST00000621152 BTBD18B2RXH4 712 aa23.03■■□□□ 1.28
SMC6-210ENST00000621152 TBX3O15119 743 aa23.03■■□□□ 1.28
SMC6-210ENST00000621152 BAG4O95429 457 aaKnown RBP23.03■■□□□ 1.28
SMC6-210ENST00000621152 ZSCAN20P17040 1043 aaPredicted RBP23.03■■□□□ 1.28
SMC6-210ENST00000621152 QARSP47897 775 aaKnown RBP23.03■■□□□ 1.28
SMC6-210ENST00000621152 DRP2Q13474 957 aa23.03■■□□□ 1.28
SMC6-210ENST00000621152 TRIM29Q14134 588 aa23.03■■□□□ 1.28
SMC6-210ENST00000621152 ANO5Q75V66 913 aa23.03■■□□□ 1.28
SMC6-210ENST00000621152 ATP6V0A4Q9HBG4 840 aa23.03■■□□□ 1.28
SMC6-210ENST00000621152 TBKBP1A7MCY6 615 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 DKC1O60832 514 aaKnown RBP eCLIP23.02■■□□□ 1.28
SMC6-210ENST00000621152 P4HBP07237 508 aaKnown RBP23.02■■□□□ 1.28
SMC6-210ENST00000621152 DARSP14868 501 aaKnown RBP23.02■■□□□ 1.28
SMC6-210ENST00000621152 KCNA5P22460 613 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 CDC42EP1Q00587 391 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 EPHA7Q15375 998 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 EP400NLQ6ZTU2 488 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 POTEDQ86YR6 584 aa23.02■■□□□ 1.28
SMC6-210ENST00000621152 NLRP7Q8WX94 980 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms