RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 RALGAPA2Q2PPJ7 1873 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 COL1A2P08123 1366 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 IGSF9BQ9UPX0 1349 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 CHMP2AO43633 222 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 ATP4AP20648 1035 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 GUCY1B3Q02153 619 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 FOXD4L6Q3SYB3 417 aaPredicted RBP18.12■□□□□ 0.49
CD40-207ENST00000620709 TIGD5Q53EQ6 642 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 FOXD4L3Q6VB84 417 aaPredicted RBP18.12■□□□□ 0.49
CD40-207ENST00000620709 SMAP1Q8IYB5 467 aaPredicted RBP18.12■□□□□ 0.49
CD40-207ENST00000620709 CDHR5Q9HBB8 845 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 SQORQ9Y6N5 450 aa18.12■□□□□ 0.49
CD40-207ENST00000620709 BRWD1Q9NSI6 2320 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 RPS6KA5O75582 802 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 BMPR1AP36894 532 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 TCEAL5Q5H9L2 206 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 NPAS4Q8IUM7 802 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 KIAA0319LQ8IZA0 1049 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 BBXQ8WY36 941 aaPredicted RBP18.11■□□□□ 0.49
CD40-207ENST00000620709 AIFM3Q96NN9 605 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 SH3GLB2Q9NR46 395 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
CD40-207ENST00000620709 MAFBQ9Y5Q3 323 aaPredicted RBP18.11■□□□□ 0.49
CD40-207ENST00000620709 TTC3P53804 2025 aa18.11■□□□□ 0.49
CD40-207ENST00000620709 MSH4O15457 936 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 GAS7O60861 476 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 DGKIO75912 1065 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 VTNP04004 478 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 STAG3L1P0CL83 205 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 CIITAP33076 1130 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 KIZQ2M2Z5 673 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 GJA10Q969M2 543 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 C11orf84Q9BUA3 381 aaPredicted RBP18.1■□□□□ 0.49
CD40-207ENST00000620709 NSUN3Q9H649 340 aaKnown RBP18.1■□□□□ 0.49
CD40-207ENST00000620709 PCDHA4Q9UN74 947 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 RWDD3Q9Y3V2 267 aa18.1■□□□□ 0.49
CD40-207ENST00000620709 KDM3AQ9Y4C1 1321 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 COL4A6Q14031 1691 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 DENND3A2RUS2 1198 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 ZBTB42B2RXF5 422 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 GRM6O15303 877 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 RB1P06400 928 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 XBP1P17861 261 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 GATMP50440 423 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 LRCH2Q5VUJ6 765 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 TBCKQ8TEA7 893 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 LENG9Q96B70 501 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 ZNF689Q96CS4 500 aaPredicted RBP18.09■□□□□ 0.49
CD40-207ENST00000620709 CHAMP1Q96JM3 812 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 OSMRQ99650 979 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 TEKT3Q9BXF9 490 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 TMX1Q9H3N1 280 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 DISC1Q9NRI5 854 aa18.09■□□□□ 0.49
CD40-207ENST00000620709 MRPL42Q9Y6G3 142 aaKnown RBP18.09■□□□□ 0.49
CD40-207ENST00000620709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.08■□□□□ 0.49
CD40-207ENST00000620709 H3BQ06 376 aaPredicted RBP18.08■□□□□ 0.49
CD40-207ENST00000620709 C22orf31O95567 290 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 NCLP19338 710 aaKnown RBP18.08■□□□□ 0.49
CD40-207ENST00000620709 USP11P51784 963 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 KRT85P78386 507 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 DNM1Q05193 864 aaKnown RBP18.08■□□□□ 0.49
CD40-207ENST00000620709 CSPP1Q1MSJ5 1256 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 SPOUT1Q5T280 376 aaKnown RBP18.08■□□□□ 0.49
CD40-207ENST00000620709 BLIDQ8IZY5 108 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 TMEM40Q8WWA1 233 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 RC3H2Q9HBD1 1191 aaKnown RBP18.08■□□□□ 0.49
CD40-207ENST00000620709 ALG13Q9NP73 1137 aaKnown RBP18.08■□□□□ 0.49
CD40-207ENST00000620709 ST3GAL5Q9UNP4 418 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 CEP131Q9UPN4 1083 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 AKT3Q9Y243 479 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 PCDHB7Q9Y5E2 793 aa18.08■□□□□ 0.49
CD40-207ENST00000620709 CLCN3P51790 818 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 ODR4Q5SWX8 454 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 BRAPQ7Z569 592 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
CD40-207ENST00000620709 LRRC71Q8N4P6 559 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 TMEM87AQ8NBN3 555 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 ZNF668Q96K58 619 aaPredicted RBP18.08■□□□□ 0.48
CD40-207ENST00000620709 FAM167AQ96KS9 214 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 ADAM2Q99965 735 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 UNC45AQ9H3U1 944 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 IGFLR1Q9H665 355 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 ERVK-5Q9HDB9 667 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 NRBP2Q9NSY0 501 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 GJB4Q9NTQ9 266 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 CLDND1Q9NY35 253 aa18.08■□□□□ 0.48
CD40-207ENST00000620709 MYO7AQ13402 2215 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 C5orf67F2Z3F1 127 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 GPR182O15218 404 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 EDIL3O43854 480 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 MGEA5O60502 916 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 TDP2O95551 362 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 OATP04181 439 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 SARSP49591 514 aaKnown RBP18.07■□□□□ 0.48
CD40-207ENST00000620709 CRYBB1P53674 252 aaPredicted RBP18.07■□□□□ 0.48
CD40-207ENST00000620709 PRKCEQ02156 737 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 SAFBQ15424 915 aaKnown RBP eCLIP18.07■□□□□ 0.48
CD40-207ENST00000620709 LEXMQ3ZCV2 418 aa18.07■□□□□ 0.48
CD40-207ENST00000620709 PTCRAQ6ISU1 281 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms