RNA–Protein interactions for RNA: ENST00000616084.1

PCIF1-203, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 2

Gene PCIF1, Length 627 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-203ENST00000616084 KDM3AQ9Y4C1 1321 aa13.09□□□□□ -0.31
PCIF1-203ENST00000616084 MYO9BQ13459 2157 aa13.08□□□□□ -0.31
PCIF1-203ENST00000616084 ARHGEF35A5YM69 484 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 NBNO60934 754 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 CHRNA1P02708 482 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 ACTN1P12814 892 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 XRCC6P12956 609 aaKnown RBP eCLIP13.08□□□□□ -0.32
PCIF1-203ENST00000616084 LONP1P36776 959 aaKnown RBP13.08□□□□□ -0.32
PCIF1-203ENST00000616084 RFC5P40937 340 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 UBA7P41226 1012 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 NASPP49321 788 aaPredicted RBP13.08□□□□□ -0.32
PCIF1-203ENST00000616084 RARRES1P49788 294 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 GRIN1Q05586 938 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 MGAT3Q09327 533 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 SLC39A14Q15043 492 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 SHHQ15465 462 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 C9orf50Q5SZB4 431 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 CABP7Q86V35 215 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 EXOC8Q8IYI6 725 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 TDHQ8IZJ6 230 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 RASSF8Q8NHQ8 419 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 RNPC3Q96LT9 517 aaKnown RBP13.08□□□□□ -0.32
PCIF1-203ENST00000616084 SCLT1Q96NL6 688 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 CEP89Q96ST8 783 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 CELF4Q9BZC1 486 aaKnown RBP13.08□□□□□ -0.32
PCIF1-203ENST00000616084 MTIF3Q9H2K0 278 aaKnown RBP13.08□□□□□ -0.32
PCIF1-203ENST00000616084 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
PCIF1-203ENST00000616084 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
PCIF1-203ENST00000616084 ZBBXA8MT70 800 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 SPTLC2O15270 562 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 YEATS4O95619 227 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 GHRP10912 638 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 NCLP19338 710 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 NUCB2P80303 420 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 DNM1Q05193 864 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 MBTPS1Q14703 1052 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 EMC2Q15006 297 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 ECM1Q16610 540 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 TCP11Q8WWU5 503 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 SEPT8Q92599 483 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 CALML4Q96GE6 196 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 ZNF668Q96K58 619 aaPredicted RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 PLIN2Q99541 437 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 MTRQ99707 1265 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 CSRNP2Q9H175 543 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 PRO3102Q9H379 93 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 DHX33Q9H6R0 707 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 SUCLA2Q9P2R7 463 aaPredicted RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 FBXO2Q9UK22 296 aaPredicted RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 DBR1Q9UK59 544 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 CFAP45Q9UL16 551 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 DNM3Q9UQ16 869 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 ATP6V1DQ9Y5K8 247 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 SRPRBQ9Y5M8 271 aaKnown RBP13.07□□□□□ -0.32
PCIF1-203ENST00000616084 PTPRSQ13332 1948 aa13.07□□□□□ -0.32
PCIF1-203ENST00000616084 IGKV6-21A0A0C4DH24 114 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 A0A1W2PPC1 479 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 GAS2O43903 313 aaKnown RBP13.06□□□□□ -0.32
PCIF1-203ENST00000616084 DGAT1O75907 488 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 CXCL10P02778 98 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 TXLNAP40222 546 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 NLRP11P59045 1033 aaKnown RBP13.06□□□□□ -0.32
PCIF1-203ENST00000616084 DRP2Q13474 957 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 GPNMBQ14956 572 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 KIZQ2M2Z5 673 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 FBXO47Q5MNV8 452 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 CNKSR3Q6P9H4 555 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 LINC01465Q8N7H1 131 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 DBF4BQ8NFT6 615 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 TMEM143Q96AN5 459 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 NT5C3AQ9H0P0 336 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 ATP6V0A4Q9HBG4 840 aa13.06□□□□□ -0.32
PCIF1-203ENST00000616084 E9PMD0 336 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 SLC26A4O43511 780 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 PPP6R2O75170 966 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 EYA4O95677 639 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCIF1-203ENST00000616084 CRYBB1P53674 252 aaPredicted RBP13.05□□□□□ -0.32
PCIF1-203ENST00000616084 KRT85P78386 507 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 GRB10Q13322 594 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 LPIN1Q14693 890 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 TSHZ1Q6ZSZ6 1077 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 MAEAQ7L5Y9 396 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 RHPN2Q8IUC4 686 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
PCIF1-203ENST00000616084 USP38Q8NB14 1042 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms