RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TNFAIP2Q03169 654 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 PALB2Q86YC2 1186 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 GIMAP8Q8ND71 665 aaPredicted RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 DIS3LQ8TF46 1054 aaKnown RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 SMAD5Q99717 465 aaKnown RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 K7ERI5 159 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 SLC8A1P32418 973 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 APPBP2Q92624 585 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 ZNF594Q96JF6 807 aaPredicted RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 SYBUQ9NX95 663 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 A0A087X0T9 212 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 SUPT3HO75486 399 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 TAF1CQ15572 869 aaPredicted RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 ANO1Q5XXA6 986 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 RASSF4Q9H2L5 321 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 CCDC85CA6NKD9 419 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 SKAP2O75563 359 aaPredicted RBP13.49□□□□□ -0.25
TCF4-248ENST00000616053 TTLL4Q14679 1199 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 OR6P1Q8NGX9 317 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 STMN3Q9NZ72 180 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
TCF4-248ENST00000616053 ZMYM3Q14202 1370 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 MLNP12872 115 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 MORF4L2Q15014 288 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 C11orf74Q86VG3 221 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 STAMQ92783 540 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 FAM161BQ96MY7 647 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 TUBGCP2Q9BSJ2 902 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 OPLAHO14841 1288 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 GSTA3Q16772 222 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 SIK2Q9H0K1 926 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 PSMD12O00232 456 aaPredicted RBP13.48□□□□□ -0.25
TCF4-248ENST00000616053 VCAM1P19320 739 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 CUTAO60888 179 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 ZBTB7AO95365 584 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 ALDH1A3P47895 512 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 ZWILCHQ9H900 591 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 BUB1O43683 1085 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
TCF4-248ENST00000616053 NME3Q13232 169 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 FSCBQ5H9T9 825 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 PCIF1Q9H4Z3 704 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 PCDHB7Q9Y5E2 793 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 KLRF2D3W0D1 207 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 ABTB1Q969K4 478 aaPredicted RBP13.48□□□□□ -0.25
TCF4-248ENST00000616053 ZNF512Q96ME7 567 aaPredicted RBP13.48□□□□□ -0.25
TCF4-248ENST00000616053 BTN2A1Q7KYR7 527 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 FBXO10Q9UK96 956 aa13.48□□□□□ -0.25
TCF4-248ENST00000616053 CROCCQ5TZA2 2017 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 GCP02774 474 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 VCLP18206 1134 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 YWHAQP27348 245 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ITGADQ13349 1161 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 NAA35Q5VZE5 725 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 CYP4F22Q6NT55 531 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 THNSL1Q8IYQ7 743 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 JADE3Q92613 823 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 PSMD14O00487 310 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 SOAT1P35610 550 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 E2F5Q15329 346 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 BBS9Q3SYG4 887 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ANKRD40Q6AI12 368 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 KCTD1Q719H9 257 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 RNF135Q8IUD6 432 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 KRT33AO76009 404 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 WDR47O94967 919 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 AKAP5P24588 427 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
TCF4-248ENST00000616053 ZNF341Q9BYN7 854 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ZNF556Q9HAH1 456 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 STK17AQ9UEE5 414 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
TCF4-248ENST00000616053 NRG3P56975 720 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ZNF667Q5HYK9 610 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 SPIRE2Q8WWL2 714 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 MEIS3Q99687 375 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 WDR11Q9BZH6 1224 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 EHD2Q9NZN4 543 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 STXBP3O00186 592 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ENO2P09104 434 aaPredicted RBP13.47□□□□□ -0.25
TCF4-248ENST00000616053 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 SPZ1Q9BXG8 430 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 BABAM1Q9NWV8 329 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 USP17L21D6R901 530 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 DFFAO00273 331 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 FCER1AP12319 257 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ZSCAN23Q3MJ62 389 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
TCF4-248ENST00000616053 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms