RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 BZW1Q7L1Q6 419 aaKnown RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 VPS36Q86VN1 386 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 ZNF34Q8IZ26 560 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 RNF25Q96BH1 459 aaPredicted RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 CTNNAL1Q9UBT7 734 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 PCDHA12Q9UN75 941 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 KRT16P08779 473 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 CNGA1P29973 690 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 PICALMQ13492 652 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 IFI16Q16666 785 aaKnown RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 POTEGQ6S5H5 508 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 POTEEQ6S8J3 1075 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 C3orf20Q8ND61 904 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 RBM46Q8TBY0 533 aaKnown RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 TBC1D22AQ8WUA7 517 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 POP1Q99575 1024 aaKnown RBP14.26□□□□□ -0.13
MSH6-214ENST00000616033 GCNT4Q9P109 453 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 C15orf41Q9Y2V0 281 aa14.26□□□□□ -0.13
MSH6-214ENST00000616033 PPP1R2P41236 205 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 AGBL2Q5U5Z8 902 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 CAPN12Q6ZSI9 719 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 CCDC105Q8IYK2 499 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 EYA3Q99504 573 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 SH3GL3Q99963 347 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 MINPP1Q9UNW1 487 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 PHRF1Q9P1Y6 1649 aaKnown RBP14.25□□□□□ -0.13
MSH6-214ENST00000616033 DISP2A7MBM2 1401 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 LOC102724428A0A0B4J2F2 783 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 LAD1O00515 517 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 ECEL1O95672 775 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 XRCC5P13010 732 aaKnown RBP14.25□□□□□ -0.13
MSH6-214ENST00000616033 SIK1P57059 783 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 KCNA1Q09470 495 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 ITPK1Q13572 414 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 TAF11Q15544 211 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 TBC1D10BQ4KMP7 808 aaPredicted RBP14.25□□□□□ -0.13
MSH6-214ENST00000616033 PHLDB2Q86SQ0 1253 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 SLC35G2Q8TBE7 412 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 KDM4CQ9H3R0 1056 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 NOP53Q9NZM5 478 aaKnown RBP14.25□□□□□ -0.13
MSH6-214ENST00000616033 PCK1P35558 622 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 MRPL12P52815 198 aaKnown RBP14.25□□□□□ -0.13
MSH6-214ENST00000616033 GRIK5Q16478 980 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 CCDC65Q8IXS2 484 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
MSH6-214ENST00000616033 GOLGA6L10A0A0M3HER8 536 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 M0R2N6 131 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 RASGRF2O14827 1237 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 SLURP2P0DP57 97 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 PRPHP41219 470 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 ZNF449Q6P9G9 518 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 CTNNBL1Q8WYA6 563 aaPredicted RBP14.24□□□□□ -0.13
MSH6-214ENST00000616033 IQCDQ96DY2 449 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 ZNF570Q96NI8 536 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 PAGR1Q9BTK6 254 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 RIC8AQ9NPQ8 531 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 FAM114A2Q9NRY5 505 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 ANKIB1Q9P2G1 1089 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 DDX25Q9UHL0 483 aaKnown RBP14.24□□□□□ -0.13
MSH6-214ENST00000616033 USP54Q70EL1 1684 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 PVALEFA0A1B0GWK0 134 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 ATMINO43313 823 aaPredicted RBP14.24□□□□□ -0.13
MSH6-214ENST00000616033 GH1P01241 217 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 NQO1P15559 274 aaKnown RBP14.24□□□□□ -0.13
MSH6-214ENST00000616033 COL18A1P39060 1754 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 MARCKSL1P49006 195 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 MESDQ14696 234 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 HP1BP3Q5SSJ5 553 aaPredicted RBP14.24□□□□□ -0.13
MSH6-214ENST00000616033 SCFD1Q8WVM8 642 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 FAM118BQ9BPY3 351 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 MAGEF1Q9HAY2 307 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 SH3GLB2Q9NR46 395 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 ATP8A2Q9NTI2 1148 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
MSH6-214ENST00000616033 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 PLA2G4BP0C869 781 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 SNAP25P60880 206 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 IRF2BP2Q7Z5L9 587 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 DDX23Q9BUQ8 820 aaKnown RBP14.24□□□□□ -0.13
MSH6-214ENST00000616033 RAB17Q9H0T7 212 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 TAS2R14Q9NYV8 317 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
MSH6-214ENST00000616033 IGSF9BQ9UPX0 1349 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 RSPH10B2B2RC85 870 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 DNAJC8O75937 253 aaPredicted RBP14.23□□□□□ -0.13
MSH6-214ENST00000616033 GCNT3O95395 438 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 RSPH10BP0C881 870 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
MSH6-214ENST00000616033 UBE4AQ14139 1066 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms