RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 CCND1P24385 295 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 ICA1LQ8NDH6 482 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 DYNLL2Q96FJ2 89 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 RBM41Q96IZ5 413 aaKnown RBP20.18■□□□□ 0.82
SPAST-203ENST00000615843 XPO6Q96QU8 1125 aaKnown RBP20.18■□□□□ 0.82
SPAST-203ENST00000615843 FBXO2Q9UK22 296 aaPredicted RBP20.18■□□□□ 0.82
SPAST-203ENST00000615843 NR3C1P04150 777 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 SRGAP2BP0DMP2 458 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 RCAN1P53805 252 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 OCA2Q04671 838 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 RAD54LQ92698 747 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 EDEM3Q9BZQ6 932 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 SEC31BQ9NQW1 1179 aa20.18■□□□□ 0.82
SPAST-203ENST00000615843 USP17L3A6NCW0 530 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 USP17L4A6NCW7 530 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 KITP10721 976 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 ATP2B4P23634 1241 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 SCNN1DP51172 638 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 SEC24CP53992 1094 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 USP17L1Q7RTZ2 530 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 NACA2Q9H009 215 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.17■□□□□ 0.829e-7■■□□□ 11.8
SPAST-203ENST00000615843 TRPC5Q9UL62 973 aaPredicted RBP20.17■□□□□ 0.82
SPAST-203ENST00000615843 USP15Q9Y4E8 981 aaPredicted RBP20.17■□□□□ 0.82
SPAST-203ENST00000615843 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 POTEMA6NI47 508 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 PFDN6O15212 129 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 SEMA3FQ13275 785 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 LRRC31Q6UY01 552 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 MED14O60244 1454 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 PSMD14O00487 310 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 FGFR4P22455 802 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 COASYQ13057 564 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 DGKHQ86XP1 1220 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 ZIM3Q96PE6 472 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 FAM107AO95990 144 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 STAT2P52630 851 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 TRIM59Q8IWR1 403 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 GUF1Q8N442 669 aaKnown RBP20.17■□□□□ 0.82
SPAST-203ENST00000615843 HOOK2Q96ED9 719 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 ADPGKQ9BRR6 497 aa20.17■□□□□ 0.82
SPAST-203ENST00000615843 IFRD2Q12894 506 aaPredicted RBP20.16■□□□□ 0.82
SPAST-203ENST00000615843 SESTD1Q86VW0 696 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 ATP6V0A1Q93050 837 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 FAF2Q96CS3 445 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 SNF8Q96H20 258 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 C8orf37Q96NL8 207 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 CCPG1Q9ULG6 757 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 PRPSAP2O60256 369 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 CFAP65Q6ZU64 1925 aaKnown RBP20.16■□□□□ 0.82
SPAST-203ENST00000615843 SEPT9Q9UHD8 586 aaPredicted RBP20.16■□□□□ 0.82
SPAST-203ENST00000615843 TTC7AQ9ULT0 858 aaPredicted RBP20.16■□□□□ 0.82
SPAST-203ENST00000615843 DNAJC6O75061 913 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 ABCB5Q2M3G0 1257 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 AGBL2Q5U5Z8 902 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 TRIM15Q9C019 465 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 MAGED2Q9UNF1 606 aaPredicted RBP20.16■□□□□ 0.82
SPAST-203ENST00000615843 NCOA3Q9Y6Q9 1424 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 GSTA4O15217 222 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 ALCAMQ13740 583 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 TMEM259Q4ZIN3 620 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 TEX9Q8N6V9 391 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 TTLL11Q8NHH1 800 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 CCDC124Q96CT7 223 aaKnown RBP20.16■□□□□ 0.82
SPAST-203ENST00000615843 ZNF711Q9Y462 761 aa20.16■□□□□ 0.82
SPAST-203ENST00000615843 GOLGA8IPA6NC78 632 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 GOLGA8JA6NMD2 632 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 GOLGA8MH3BSY2 632 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 MED7O43513 233 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 ARL4AP40617 200 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 NOP14P78316 857 aaKnown RBP20.15■□□□□ 0.82
SPAST-203ENST00000615843 TXNRD1Q16881 649 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 RFX8Q6ZV50 586 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 STOX1Q6ZVD7 989 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 TRPM8Q7Z2W7 1104 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 SFR1Q86XK3 245 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 AGGF1Q8N302 714 aaeCLIP20.15■□□□□ 0.82
SPAST-203ENST00000615843 SLC26A7Q8TE54 656 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 TRPV6Q9H1D0 765 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 ZWILCHQ9H900 591 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 H7C1W4 665 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 NCAPHQ15003 741 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 DLGAP5Q15398 846 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 PTGISQ16647 500 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 ZNF564Q8TBZ8 553 aaPredicted RBP20.15■□□□□ 0.82
SPAST-203ENST00000615843 ANKRD36BP1Q96IX9 119 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.15■□□□□ 0.82
SPAST-203ENST00000615843 RBM12Q9NTZ6 932 aaKnown RBP20.15■□□□□ 0.82
SPAST-203ENST00000615843 TRAF3IP3Q9Y228 551 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 SFI1A8K8P3 1242 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 WDR64B1ANS9 1081 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 PYGBP11216 843 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 RFFLQ8WZ73 363 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 RNPC3Q96LT9 517 aaKnown RBP20.15■□□□□ 0.82
SPAST-203ENST00000615843 CD248Q9HCU0 757 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 HNRNPCL1O60812 293 aaKnown RBP20.15■□□□□ 0.82
SPAST-203ENST00000615843 CUL3Q13618 768 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 RSPH3Q86UC2 560 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 REXO1L1PQ8IX06 675 aa20.15■□□□□ 0.82
SPAST-203ENST00000615843 NRBP2Q9NSY0 501 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms