RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 GOPCQ9HD26 462 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
ATF3-211ENST00000613954 BZW2Q9Y6E2 419 aaKnown RBP12.23□□□□□ -0.45
ATF3-211ENST00000613954 ZSCAN5CA6NGD5 496 aaPredicted RBP12.23□□□□□ -0.45
ATF3-211ENST00000613954 LMNB1P20700 586 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 ANXA13P27216 316 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 RDXP35241 583 aaKnown RBP12.23□□□□□ -0.45
ATF3-211ENST00000613954 CDR1P51861 262 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 HLTFQ14527 1009 aaKnown RBP eCLIP12.23□□□□□ -0.45
ATF3-211ENST00000613954 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
ATF3-211ENST00000613954 AGBL2Q5U5Z8 902 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 C6orf89Q6UWU4 347 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 BTNL9Q6UXG8 535 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 TAX1BP1Q86VP1 789 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 TEPSINQ96N21 525 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
ATF3-211ENST00000613954 TMX2Q9Y320 296 aa12.23□□□□□ -0.45
ATF3-211ENST00000613954 GMNCA6NCL1 334 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 MYO1FO00160 1098 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 HSD17B3P37058 310 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 EPS15P42566 896 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 USP11P51784 963 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 QRICH1Q2TAL8 776 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 FAM26FQ5R3K3 315 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 SYDE2Q5VT97 1194 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 CCDC50Q8IVM0 306 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 TRIM59Q8IWR1 403 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 SCFD2Q8WU76 684 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 LMBR1Q8WVP7 490 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 P3H4Q92791 437 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 CUL5Q93034 780 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
ATF3-211ENST00000613954 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
ATF3-211ENST00000613954 A0A087X0T9 212 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 KCNK3O14649 394 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 SLC26A4O43511 780 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 KIF4AO95239 1232 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 ASNSP08243 561 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 FAM228BP0C875 321 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 CTNNA1P35221 906 aaKnown RBP12.21□□□□□ -0.45
ATF3-211ENST00000613954 ECE1P42892 770 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 MRPL12P52815 198 aaKnown RBP12.21□□□□□ -0.45
ATF3-211ENST00000613954 COASYQ13057 564 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 IKQ13123 557 aaPredicted RBP12.21□□□□□ -0.45
ATF3-211ENST00000613954 KLHL7Q8IXQ5 586 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 ACER1Q8TDN7 264 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 CYFIP2Q96F07 1278 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 NT5C3AQ9H0P0 336 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 ADAMTS1Q9UHI8 967 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 KDM3AQ9Y4C1 1321 aa12.21□□□□□ -0.45
ATF3-211ENST00000613954 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 BHMG1C9JSJ3 638 aaPredicted RBP12.21□□□□□ -0.46
ATF3-211ENST00000613954 PGRMC1O00264 195 aaKnown RBP12.21□□□□□ -0.46
ATF3-211ENST00000613954 CLGNO14967 610 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 RASSF9O75901 435 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 CCDC172P0C7W6 258 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 HPDP32754 393 aaPredicted RBP12.21□□□□□ -0.46
ATF3-211ENST00000613954 DNA2P51530 1060 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 SEC24CP53992 1094 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 ERVK-9P63128 1117 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 IFT88Q13099 833 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 CCDC65Q8IXS2 484 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 CCDC13Q8IYE1 715 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 GPC2Q8N158 579 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 SLITRK6Q9H5Y7 841 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 GINM1Q9NU53 330 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 PANK4Q9NVE7 773 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 TMEM260Q9NX78 707 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 PCDHA1Q9Y5I3 950 aa12.21□□□□□ -0.46
ATF3-211ENST00000613954 H0YGN5 161 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 TRAPPC3O43617 180 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 ASTN2O75129 1339 aaPredicted RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 PAEPP09466 180 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 ECHS1P30084 290 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 CLK2P49760 499 aaKnown RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 PPP2R2AP63151 447 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 LRRC41Q15345 812 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 SPDYCQ5MJ68 293 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 GPATCH11Q8N954 259 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 FAM133AQ8N9E0 248 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 DNAJC19Q96DA6 116 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.469e-6■■■■■ 27.7
ATF3-211ENST00000613954 PSTPIP2Q9H939 334 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 PPANQ9NQ55 473 aaKnown RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 SLC12A6Q9UHW9 1150 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 SCAF8Q9UPN6 1271 aaKnown RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 DICER1Q9UPY3 1922 aaKnown RBP12.2□□□□□ -0.46
ATF3-211ENST00000613954 NFS1Q9Y697 457 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 C5orf60A6NFR6 353 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 POTEMA6NI47 508 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 ZNF844Q08AG5 666 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 HYIQ5T013 277 aa12.2□□□□□ -0.46
ATF3-211ENST00000613954 APOBEC3FQ8IUX4 373 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms