RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 NLRP3Q96P20 1036 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 ATP8A2Q9NTI2 1148 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 AMFRQ9UKV5 643 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 EIF4E1BA6NMX2 242 aaKnown RBP17.97■□□□□ 0.47
TSKU-205ENST00000612930 FLOT1O75955 427 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 UPP2O95045 317 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 EPS15P42566 896 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 CCDC152Q4G0S7 254 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 CCDC38Q502W7 563 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 KIAA1755Q5JYT7 1200 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 TBC1D16Q8TBP0 767 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 KCNV2Q8TDN2 545 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 KCTD10Q9H3F6 313 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 C6orf50Q9HD87 102 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 GRHL1Q9NZI5 618 aa17.97■□□□□ 0.47
TSKU-205ENST00000612930 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
TSKU-205ENST00000612930 DBR1Q9UK59 544 aaKnown RBP17.97■□□□□ 0.47
TSKU-205ENST00000612930 AJAP1Q9UKB5 411 aaPredicted RBP17.97■□□□□ 0.47
TSKU-205ENST00000612930 DDX3XO00571 662 aaKnown RBP eCLIP17.96■□□□□ 0.471e-7■■■■■ 37.8
TSKU-205ENST00000612930 AP1G2O75843 785 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 NPEPPSP55786 919 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 AUHQ13825 339 aaKnown RBP17.96■□□□□ 0.47
TSKU-205ENST00000612930 PLS1Q14651 629 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 LRRC14Q15048 493 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 FITM2Q8N6M3 262 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 DYNLL2Q96FJ2 89 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 OSGEPQ9NPF4 335 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 ETAA1Q9NY74 926 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 ZFATQ9P243 1243 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 PPP1R9AQ9ULJ8 1098 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 PCDHA2Q9Y5H9 948 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 TCP11X1B4DZS4 312 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 ADAM9Q13443 819 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 PRPF4BQ13523 1007 aaKnown RBP17.96■□□□□ 0.47
TSKU-205ENST00000612930 SEPT2Q15019 361 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 MAEAQ7L5Y9 396 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 JAMLQ86YT9 394 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 TMEM109Q9BVC6 243 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 ATP8B3O60423 1300 aa17.96■□□□□ 0.47
TSKU-205ENST00000612930 KLRF2D3W0D1 207 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 SUN1O94901 812 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 SNUPNO95149 360 aaKnown RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 GNA11P29992 359 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 TAF11Q15544 211 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 ZC3H3Q8IXZ2 948 aaKnown RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 NAF1Q96HR8 494 aaKnown RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 MOV10L1Q9BXT6 1211 aaKnown RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 OSBPL1AQ9BXW6 950 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 LRRC27Q9C0I9 530 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 CCDC113Q9H0I3 377 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 GOLGA6L10A0A0M3HER8 536 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 FAM187AA6NFU0 413 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 TDP2O95551 362 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 PON1P27169 355 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 EXOC3L1Q86VI1 746 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 GBP7Q8N8V2 638 aaPredicted RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 SCFD1Q8WVM8 642 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 HDAC9Q9UKV0 1011 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 GJB6O95452 261 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 PECAM1P16284 738 aaPredicted RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 ATP4AP20648 1035 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 GALCP54803 685 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 DRG2P55039 364 aaKnown RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 RWDD2BP57060 319 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 ORC2Q13416 577 aaPredicted RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 TMEM266Q2M3C6 531 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 U2AF1L4Q8WU68 220 aaKnown RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 TMEM47Q9BQJ4 181 aa17.95■□□□□ 0.46
TSKU-205ENST00000612930 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
TSKU-205ENST00000612930 LUC7L3O95232 432 aaKnown RBP17.94■□□□□ 0.46
TSKU-205ENST00000612930 FESP07332 822 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 FGFR4P22455 802 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 LACTBP83111 547 aaPredicted RBP17.94■□□□□ 0.46
TSKU-205ENST00000612930 ATP11AP98196 1134 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 ZNF211Q13398 564 aaPredicted RBP17.94■□□□□ 0.46
TSKU-205ENST00000612930 PDIA5Q14554 519 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 BTNL9Q6UXG8 535 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 MGARPQ8TDB4 240 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 FAM84BQ96KN1 310 aaPredicted RBP17.94■□□□□ 0.46
TSKU-205ENST00000612930 IFT74Q96LB3 600 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 NKX1-2Q9UD57 310 aaPredicted RBP17.94■□□□□ 0.46
TSKU-205ENST00000612930 INTUQ9ULD6 942 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 RASGRF2O14827 1237 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 CREB1P16220 341 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 PTGIRP43119 386 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
TSKU-205ENST00000612930 MAPK7Q13164 816 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 NBPF20Q3BBV1 942 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 BARGINQ6ZT62 677 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 OLIG1Q8TAK6 271 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 SPZ1Q9BXG8 430 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 PRKAG3Q9UGI9 489 aa17.94■□□□□ 0.46
TSKU-205ENST00000612930 DPPA5A6NC42 116 aa17.93■□□□□ 0.46
TSKU-205ENST00000612930 RIPK2O43353 540 aa17.93■□□□□ 0.46
TSKU-205ENST00000612930 RPL21P46778 160 aaKnown RBP17.93■□□□□ 0.46
TSKU-205ENST00000612930 PPATQ06203 517 aa17.93■□□□□ 0.46
TSKU-205ENST00000612930 DHX34Q14147 1143 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms