RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 GUCY2FP51841 1108 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 AMPD3Q01432 767 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 EAPPQ56P03 285 aaPredicted RBP11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 USP17L6PQ6QN14 398 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 CCNI2Q6ZMN8 369 aaPredicted RBP11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 TSEN2Q8NCE0 465 aaKnown RBP11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 EHBP1Q8NDI1 1231 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM81AQ8TBF8 368 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 PACSIN1Q9BY11 444 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 CUEDC2Q9H467 287 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 RIOX1Q9H6W3 641 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 ODF2LQ9ULJ1 636 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 SIK3Q9Y2K2 1263 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 ATP6V1G1O75348 118 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 CACNB3P54284 484 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 TMED1Q13445 227 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 RAPGEF1Q13905 1077 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 CCDC80Q76M96 950 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 NUP58Q9BVL2 599 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 METTL14Q9HCE5 456 aaKnown RBP11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 PLAGL2Q9UPG8 496 aa11.67□□□□□ -0.54
PCDHGC3-202ENST00000611950 MEIS1O00470 390 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 PRPF6O94906 941 aaKnown RBP11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 GTF2IP78347 998 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 HDLBPQ00341 1268 aaKnown RBP11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 KRT79Q5XKE5 535 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 CENPPQ6IPU0 288 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 MORC4Q8TE76 937 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 BHMTQ93088 406 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 MTMR9Q96QG7 549 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 ERGIC2Q96RQ1 377 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 LSM14BQ9BX40 385 aaKnown RBP11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 MAGEF1Q9HAY2 307 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 HOMER3Q9NSC5 361 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 MTMR4Q9NYA4 1195 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 LTBP3Q9NS15 1303 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 ESYT2A0FGR8 921 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 IQCA1LA6NCM1 817 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 KRT14P02533 472 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 ACTN1P12814 892 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 ADCY7P51828 1080 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 NSUN2Q08J23 767 aaKnown RBP eCLIP11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 KCNA1Q09470 495 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 TRIM58Q8NG06 486 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 EPAS1Q99814 870 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 CENPHQ9H3R5 247 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 DDX4Q9NQI0 724 aaKnown RBP11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 ADAMTS1Q9UHI8 967 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 SAMM50Q9Y512 469 aa11.66□□□□□ -0.54
PCDHGC3-202ENST00000611950 CFAP69A5D8W1 941 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 ZNF189O75820 626 aaPredicted RBP11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 ERLIN2O94905 339 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 CCT5P48643 541 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 GABPAQ06546 454 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 MAN2A1Q16706 1144 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 NOC3LQ8WTT2 800 aaKnown RBP11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 RGL1Q9NZL6 768 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 KIAA1024Q9UPX6 916 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 PLIN4Q96Q06 1357 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 PPP1R11O60927 126 aaPredicted RBP11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 KRT18P05783 430 aaKnown RBP11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM153BP0C7A2 387 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 EHHADHQ08426 723 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM153CQ494X1 144 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 C8orf74Q6P047 294 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 UNC13DQ70J99 1090 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 KLHL7Q8IXQ5 586 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 CERS5Q8N5B7 392 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 IKZF4Q9H2S9 585 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM153AQ9UHL3 310 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 NFU1Q9UMS0 254 aa11.65□□□□□ -0.54
PCDHGC3-202ENST00000611950 FOCADQ5VW36 1801 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 USP17L10C9JJH3 530 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 PALMO75781 387 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 BBOX1O75936 387 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 TGFB3P10600 412 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 CARSP49589 748 aaKnown RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 COASYQ13057 564 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 ZSCAN29Q8IWY8 852 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 FAM76AQ8TAV0 307 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 RAD54LQ92698 747 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 ALS2CR12Q96Q35 445 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 TLR10Q9BXR5 811 aa11.64□□□□□ -0.55
PCDHGC3-202ENST00000611950 DDX25Q9UHL0 483 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms