RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CHMP2AO43633 222 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 BUB1O43683 1085 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 PALMO75781 387 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ACTN1P12814 892 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 RFX1P22670 979 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 NMT1P30419 496 aaKnown RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 CASP4P49662 377 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 NPEPPSP55786 919 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 C2orf54Q08AI8 447 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ODR4Q5SWX8 454 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 PCNX4Q63HM2 1172 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 MIGA2Q7L4E1 593 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ZNF571Q7Z3V5 609 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 SLC17A8Q8NDX2 589 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 LXNQ9BS40 222 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 STK33Q9BYT3 514 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 TMEM206Q9H813 350 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 SUGCTQ9HAC7 445 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 AGPAT3Q9NRZ7 376 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 TBC1D22BQ9NU19 505 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 GCNT4Q9P109 453 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 LARSQ9P2J5 1176 aaKnown RBP11.41□□□□□ -0.58
PABPC1-224ENST00000610907 NAGPAQ9UK23 515 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 NENFQ9UMX5 172 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 UBIAD1Q9Y5Z9 338 aa11.41□□□□□ -0.58
PABPC1-224ENST00000610907 ZNF536O15090 1300 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 A0A0U1RQG5 324 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-224ENST00000610907 SFI1A8K8P3 1242 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 PHF20L1A8MW92 1017 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 WNT10BO00744 389 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 PPP1R37O75864 691 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 DPEP1P16444 411 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 ITGB5P18084 799 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 FMO5P49326 533 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 ARID5AQ03989 594 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 KCNA1Q09470 495 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 ALKBH5Q6P6C2 394 aaKnown RBP11.4□□□□□ -0.58
PABPC1-224ENST00000610907 EMBQ6PCB8 327 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 MIER3Q7Z3K6 550 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 C12orf56Q8IXR9 622 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 AENQ8WTP8 325 aaKnown RBP11.4□□□□□ -0.58
PABPC1-224ENST00000610907 CLEC4DQ8WXI8 215 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 TAF4BQ92750 862 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 PBKQ96KB5 322 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 KCNH7Q9NS40 1196 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 FBXO28Q9NVF7 368 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 STIM2Q9P246 746 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 HPCAL4Q9UM19 191 aa11.4□□□□□ -0.58
PABPC1-224ENST00000610907 RBBP6Q7Z6E9 1792 aaKnown RBP11.4□□□□□ -0.58
PABPC1-224ENST00000610907 MAPK13O15264 365 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 P4HA2O15460 535 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 DHX15O43143 795 aaKnown RBP11.39□□□□□ -0.59
PABPC1-224ENST00000610907 H2AFZP0C0S5 128 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 LMNB1P20700 586 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 RPS12P25398 132 aaKnown RBP11.39□□□□□ -0.59
PABPC1-224ENST00000610907 INPP5BP32019 993 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 TNNT3P45378 269 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-224ENST00000610907 EPHB4P54760 987 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 UBXN2AP68543 259 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 APBA1Q02410 837 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 CXCL9Q07325 125 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 NNTQ13423 1086 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 ZYXQ15942 572 aaKnown RBP11.39□□□□□ -0.59
PABPC1-224ENST00000610907 ZC2HC1CQ53FD0 456 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-224ENST00000610907 CIAPIN1Q6FI81 312 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 XRRA1Q6P2D8 792 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 H2AFVQ71UI9 128 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 IFT20Q8IY31 132 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 RBM46Q8TBY0 533 aaKnown RBP11.39□□□□□ -0.59
PABPC1-224ENST00000610907 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■■■ 54.4
PABPC1-224ENST00000610907 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
PABPC1-224ENST00000610907 AGBL1Q96MI9 1066 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 IWS1Q96ST2 819 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 LRRC1Q9BTT6 524 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 ST6GALNAC4Q9H4F1 302 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 SLC38A10Q9HBR0 1119 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 MYOZ2Q9NPC6 264 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 COL4A5P29400 1685 aa11.39□□□□□ -0.59
PABPC1-224ENST00000610907 ZBTB39O15060 712 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 NCK2O43639 380 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 CTNND1O60716 968 aaKnown RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 N4BP1O75113 896 aaKnown RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 HIP1RO75146 1068 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 POLD1P28340 1107 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 SOX5P35711 763 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 ZNF280AP59817 542 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 MCCD1P59942 119 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 TGFB2P61812 414 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 CETN1Q12798 172 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 MAPK7Q13164 816 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 RPS6KA1Q15418 735 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 TKFCQ3LXA3 575 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 C8orf74Q6P047 294 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 INTS8Q75QN2 995 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms