RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CSTF3Q12996 717 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 XRCC4Q13426 336 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 RIPK1Q13546 671 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 TCEAL1Q15170 157 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CCNG2Q16589 344 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 PPP6R3Q5H9R7 873 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 MAP3K21Q5TCX8 1036 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 METTL11BQ5VVY1 283 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 C9orf131Q5VYM1 1079 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SIGIRRQ6IA17 410 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 PPP1R2P3Q6NXS1 205 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 MFSD6Q6ZSS7 791 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 INTS8Q75QN2 995 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 TBC1D1Q86TI0 1168 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ARFGAP2Q8N6H7 521 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ENAHQ8N8S7 591 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 TMC2Q8TDI7 906 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SEPT8Q92599 483 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 NCLNQ969V3 563 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 COG8Q96MW5 612 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 RUNDC3BQ96NL0 473 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 C8orf37Q96NL8 207 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CCDC28BQ9BUN5 200 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SH2D4AQ9H788 454 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 TMEM206Q9H813 350 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 PIH1D1Q9NWS0 290 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 STIM2Q9P246 746 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 TSKSQ9UJT2 592 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 LTN1O94822 1766 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 TLDC2A0PJX2 215 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ORC4O43929 436 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 RANBP6O60518 1105 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 GADD45BO75293 160 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 GLRX3O76003 335 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 IL33O95760 270 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CHEK2O96017 543 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 NPPAP01160 153 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ZNF16P17020 682 aaPredicted RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ATF6P18850 670 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SOX11P35716 441 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ACADVLP49748 655 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 IST1P53990 364 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 PLTPP55058 493 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 TYRO3Q06418 890 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 PDCLQ13371 301 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 DCTN2Q13561 401 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 RASGRF1Q13972 1273 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CWF19L2Q2TBE0 894 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ANO6Q4KMQ2 910 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ZBTB41Q5SVQ8 909 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ZMYM1Q5SVZ6 1142 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SYDE2Q5VT97 1194 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 NAA35Q5VZE5 725 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 LRRC8BQ6P9F7 803 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 DHX32Q7L7V1 743 aaKnown RBP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SPATA24Q86W54 205 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 STX12Q86Y82 276 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 RHOT2Q8IXI1 618 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 IFT74Q96LB3 600 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SH3GL2Q99962 352 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 APOL5Q9BWW9 433 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CALN1Q9BXU9 219 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 SHCBP1LQ9BZQ2 653 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 KLHL4Q9C0H6 718 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 EPN3Q9H201 632 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CAAP1Q9H8G2 361 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CASS4Q9NQ75 786 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 INIPQ9NRY2 104 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.09□□□□□ -1.59
HDDC2-208ENST00000609021 CTNNAL1Q9UBT7 734 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 USP16Q9Y5T5 823 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 ADGRF5Q8IZF2 1346 aa5.09□□□□□ -1.59
HDDC2-208ENST00000609021 A0A0J9YVX5 310 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 hCG_1642624A0A1W2PR95 340 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 FAM47E-STBD1D6RA91 191 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 OR5F1O95221 314 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CRYZL1O95825 349 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 ALOX5P09917 674 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 C6orf222P0C671 652 aaPredicted RBP5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CHRNB1P11230 501 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 HSPA6P17066 643 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 PRKAR1BP31321 381 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 RFC1P35251 1148 aaPredicted RBP5.09□□□□□ -1.6
HDDC2-208ENST00000609021 TRIM23P36406 574 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CASP2P42575 452 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 MTHFRP42898 656 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 SCTRP47872 440 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 KRT6CP48668 564 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 KDSRQ06136 332 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 TUBB2AQ13885 445 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CCDC6Q16204 474 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 TRIM71Q2Q1W2 868 aaKnown RBP5.09□□□□□ -1.6
HDDC2-208ENST00000609021 IFFO2Q5TF58 517 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CCDC102BQ68D86 513 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 BTNL9Q6UXG8 535 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 CACNA2D4Q7Z3S7 1137 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 PATL1Q86TB9 770 aaKnown RBP5.09□□□□□ -1.6
HDDC2-208ENST00000609021 RNF169Q8NCN4 708 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 OR7G1Q8NGA0 311 aa5.09□□□□□ -1.6
HDDC2-208ENST00000609021 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms