RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 EYSQ5T1H1 3165 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 BAG4O95429 457 aaKnown RBP16.26■□□□□ 0.19
HDDC2-204ENST00000608295 FGFR4P22455 802 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 NPEPPSP55786 919 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 ZNF174Q15697 407 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 XKR3Q5GH77 459 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 SLFN12Q8IYM2 578 aa16.26■□□□□ 0.19
HDDC2-204ENST00000608295 LINC01553A4QN01 128 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 TBX3O15119 743 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 MGEA5O60502 916 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 RPS6KA5O75582 802 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 GJB2P29033 226 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 QARSP47897 775 aaKnown RBP16.25■□□□□ 0.19
HDDC2-204ENST00000608295 NLRP11P59045 1033 aaKnown RBP16.25■□□□□ 0.19
HDDC2-204ENST00000608295 PSMC5P62195 406 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 PAN2Q504Q3 1202 aaKnown RBP16.25■□□□□ 0.19
HDDC2-204ENST00000608295 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 ANO5Q75V66 913 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
HDDC2-204ENST00000608295 SLC17A8Q8NDX2 589 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 FBXO18Q8NFZ0 1043 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 RAD9AQ99638 391 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 C17orf80Q9BSJ5 609 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 TTC12Q9H892 705 aaPredicted RBP16.25■□□□□ 0.19
HDDC2-204ENST00000608295 PRDM6Q9NQX0 595 aa16.25■□□□□ 0.19
HDDC2-204ENST00000608295 A0A087WWV3 80 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 ZBTB39O15060 712 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 CSDE1O75534 798 aaKnown RBP16.24■□□□□ 0.19
HDDC2-204ENST00000608295 STBD1O95210 358 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 GATMP50440 423 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 FAM228AQ86W67 206 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 NOSTRINQ8IVI9 506 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 TPH2Q8IWU9 490 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 NLRP7Q8WX94 980 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 TMX1Q9H3N1 280 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 COL4A6Q14031 1691 aa16.24■□□□□ 0.19
HDDC2-204ENST00000608295 TTC3P53804 2025 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 ENPP3O14638 875 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 MAGEB2O15479 319 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 GPR32O75388 356 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 RPLP2P05387 115 aaKnown RBP16.23■□□□□ 0.19
HDDC2-204ENST00000608295 TMOD1P28289 359 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 EPHA7Q15375 998 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 TARBP2Q15633 366 aaKnown RBP16.23■□□□□ 0.19
HDDC2-204ENST00000608295 NME8Q8N427 588 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 LINC01465Q8N7H1 131 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 TOP1MTQ969P6 601 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 CEP170P1Q96L14 293 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 NLRP4Q96MN2 994 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 EIF2AK1Q9BQI3 630 aaKnown RBP16.23■□□□□ 0.19
HDDC2-204ENST00000608295 BACH2Q9BYV9 841 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 FOXP1Q9H334 677 aaPredicted RBP16.23■□□□□ 0.19
HDDC2-204ENST00000608295 ERVK-5Q9HDB9 667 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 PCDHA12Q9UN75 941 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 ST3GAL5Q9UNP4 418 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 INSL6Q9Y581 213 aa16.23■□□□□ 0.19
HDDC2-204ENST00000608295 PRRC2BQ5JSZ5 2229 aaKnown RBP16.23■□□□□ 0.19
HDDC2-204ENST00000608295 RALGAPA2Q2PPJ7 1873 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 KDM3AQ9Y4C1 1321 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 DENND3A2RUS2 1198 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 P4HBP07237 508 aaKnown RBP16.22■□□□□ 0.19
HDDC2-204ENST00000608295 OR52Z1P0C646 297 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 GPC3P51654 580 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 POLGP54098 1239 aaPredicted RBP16.22■□□□□ 0.19
HDDC2-204ENST00000608295 GRB10Q13322 594 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 XKR9Q5GH70 373 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 RTN4RL1Q86UN2 441 aaPredicted RBP16.22■□□□□ 0.19
HDDC2-204ENST00000608295 RHPN2Q8IUC4 686 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 KSR1Q8IVT5 923 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 TMEM143Q96AN5 459 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 CCDC43Q96MW1 224 aaKnown RBP16.22■□□□□ 0.19
HDDC2-204ENST00000608295 CYP26B1Q9NR63 512 aa16.22■□□□□ 0.19
HDDC2-204ENST00000608295 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
HDDC2-204ENST00000608295 ADGRA3Q8IWK6 1321 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 ATG2AQ2TAZ0 1938 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 H3BQV1 296 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 YWHABP31946 246 aaKnown RBP16.21■□□□□ 0.19
HDDC2-204ENST00000608295 TECP42680 631 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
HDDC2-204ENST00000608295 HTRA4P83105 476 aaPredicted RBP16.21■□□□□ 0.19
HDDC2-204ENST00000608295 SKIV2LQ15477 1246 aaKnown RBP16.21■□□□□ 0.19
HDDC2-204ENST00000608295 RNF169Q8NCN4 708 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
HDDC2-204ENST00000608295 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 ADAM2Q99965 735 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 NIFKQ9BYG3 293 aaKnown RBP16.21■□□□□ 0.19
HDDC2-204ENST00000608295 SUCLA2Q9P2R7 463 aaPredicted RBP16.21■□□□□ 0.19
HDDC2-204ENST00000608295 LRFN2Q9ULH4 789 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
HDDC2-204ENST00000608295 A0A087WZ62 844 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 CTNNB1P35222 781 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 EMC2Q15006 297 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.2■□□□□ 0.18
HDDC2-204ENST00000608295 FBXO22Q8NEZ5 403 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms