RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 GAS7O60861 476 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 PSMD10O75832 226 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 DEXIO95424 95 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 MMP1P03956 469 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 ITGB1P05556 798 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 CYP3A7P24462 503 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 GTF2F1P35269 517 aaKnown RBP eCLIP8.61□□□□□ -1.03
CUX1-219ENST00000606749 CLCN3P51790 818 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 NLRP11P59045 1033 aaKnown RBP8.61□□□□□ -1.03
CUX1-219ENST00000606749 DLX2Q07687 328 aaPredicted RBP8.61□□□□□ -1.03
CUX1-219ENST00000606749 DSC3Q14574 896 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 Q4G0T1 1027 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 FAM102BQ5T8I3 360 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 LRCH2Q5VUJ6 765 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 FAM228AQ86W67 206 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 BLIDQ8IZY5 108 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 GJD3Q8N144 294 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 LINC01465Q8N7H1 131 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 TBCKQ8TEA7 893 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 SLC5A5Q92911 643 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 GJA10Q969M2 543 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 FAM167AQ96KS9 214 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 AIFM3Q96NN9 605 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 OSMRQ99650 979 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 LRFN3Q9BTN0 628 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 C22orf23Q9BZE7 217 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 UPF3BQ9BZI7 483 aaKnown RBP8.61□□□□□ -1.03
CUX1-219ENST00000606749 ADAMTS10Q9H324 1103 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 UNC45AQ9H3U1 944 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 IGFLR1Q9H665 355 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 NLRC5Q86WI3 1866 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 MYO7AQ13402 2215 aa8.61□□□□□ -1.03
CUX1-219ENST00000606749 BRWD1Q9NSI6 2320 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 NCOR1O75376 2440 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 TBKBP1A7MCY6 615 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 GPR37L1O60883 481 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 CSPG5O95196 566 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 OATP04181 439 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 IBSPP21815 317 aaPredicted RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 TMOD1P28289 359 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 SFNP31947 248 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 IRS1P35568 1242 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 STK3Q13188 491 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 ADAM15Q13444 863 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 TARBP2Q15633 366 aaKnown RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 NPY5RQ15761 445 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 UGCGQ16739 394 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 GALNT17Q6IS24 598 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 FAM177A1Q8N128 213 aaPredicted RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 ZNF710Q8N1W2 664 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 LRRC71Q8N4P6 559 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 DAGLBQ8NCG7 672 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 POF1BQ8WVV4 589 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 TEKT3Q9BXF9 490 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 ELAC1Q9H777 363 aaKnown RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 PDRG1Q9NUG6 133 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 TYW1Q9NV66 732 aaKnown RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 AKT3Q9Y243 479 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 FAM50BQ9Y247 325 aa8.6□□□□□ -1.03
CUX1-219ENST00000606749 MYH9P35579 1960 aaKnown RBP8.6□□□□□ -1.03
CUX1-219ENST00000606749 C19orf67A6NJJ6 358 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 LINC01565O15544 149 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 CHMP2AO43633 222 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 STBD1O95210 358 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 TDP2O95551 362 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 FGFR1P11362 822 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 EIF4BP23588 611 aaKnown RBP8.59□□□□□ -1.03
CUX1-219ENST00000606749 SSTR3P32745 418 aaPredicted RBP8.59□□□□□ -1.03
CUX1-219ENST00000606749 JAK3P52333 1124 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 PRKCEQ02156 737 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 TMEM31Q5JXX7 168 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 CPLX2Q6PUV4 134 aaKnown RBP8.59□□□□□ -1.03
CUX1-219ENST00000606749 MOXD1Q6UVY6 613 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 B3GNT9Q6UX72 402 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 MIER3Q7Z3K6 550 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 ADGRD2Q7Z7M1 963 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 RDM1Q8NG50 284 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 ZNF668Q96K58 619 aaPredicted RBP8.59□□□□□ -1.03
CUX1-219ENST00000606749 MBOAT7Q96N66 472 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 CEP89Q96ST8 783 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 MAP7D2Q96T17 732 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 CWH43Q9H720 699 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 ATP6V0A4Q9HBG4 840 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 C11orf16Q9NQ32 467 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 AAASQ9NRG9 546 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 TMEM161AQ9NX61 479 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 KCNJ14Q9UNX9 436 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 PCDHB12Q9Y5F1 795 aa8.59□□□□□ -1.03
CUX1-219ENST00000606749 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
CUX1-219ENST00000606749 MBTPS2O43462 519 aa8.58□□□□□ -1.04
CUX1-219ENST00000606749 TBX10O75333 385 aa8.58□□□□□ -1.04
CUX1-219ENST00000606749 FGF18O76093 207 aa8.58□□□□□ -1.04
CUX1-219ENST00000606749 DARSP14868 501 aaKnown RBP8.58□□□□□ -1.04
CUX1-219ENST00000606749 ZSCAN20P17040 1043 aaPredicted RBP8.58□□□□□ -1.04
CUX1-219ENST00000606749 GPC3P51654 580 aa8.58□□□□□ -1.04
CUX1-219ENST00000606749 CDC42EP1Q00587 391 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms