RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 RNF113AO15541 343 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PMLP29590 882 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PRKAR1BP31321 381 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PTGS2P35354 604 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 UBXN1Q04323 297 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PLEKHO1Q53GL0 409 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 STXBP5Q5T5C0 1151 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 GKAP1Q5VSY0 366 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 SLC6A19Q695T7 634 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 LRSAM1Q6UWE0 723 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 IL17REQ8NFR9 667 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 LMBR1Q8WVP7 490 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 KIFC2Q96AC6 838 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 HNRNPABQ99729 332 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 C19orf43Q9BQ61 176 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 ADNPQ9H2P0 1102 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 ACAD9Q9H845 621 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 NOVA2Q9UNW9 492 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 DAGLAQ9Y4D2 1042 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 RGPD8O14715 1765 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 RGPD5Q99666 1765 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 MON2Q7Z3U7 1717 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 USO1O60763 962 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 ACTN1P12814 892 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 ETV1P50549 477 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 NLRP5P59047 1200 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 KCNC4Q03721 635 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 CUL3Q13618 768 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PPP2R5DQ14738 602 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PLPP7Q8NBV4 271 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 AGR3Q8TD06 166 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 RIOK1Q9BRS2 568 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 LLPHQ9BRT6 129 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 CDH19Q9H159 772 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZNF219Q9P2Y4 722 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 A0A087WUV0 522 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 GPR75-ASB3A0A0A6YYF3 556 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 HTR3EA5X5Y0 456 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 UBXN8O00124 270 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 NVLO15381 856 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 IVLP07476 585 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 MCM4P33991 863 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 ADH7P40394 386 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 NFE2L1Q14494 772 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 DSC3Q14574 896 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZNF362Q5T0B9 420 aaPredicted RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 RCSD1Q6JBY9 416 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 USP51Q70EK9 711 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 PDCD7Q8N8D1 485 aaKnown RBP6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 TRPC4APQ8TEL6 797 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 DYDC1Q8WWB3 177 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 DEPDC7Q96QD5 511 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 OSBPL9Q96SU4 736 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 APOL5Q9BWW9 433 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 VPS11Q9H270 941 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 EHMT1Q9H9B1 1298 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 SCPEP1Q9HB40 452 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 DDX19BQ9UMR2 479 aa6.32□□□□□ -1.4
COL4A3BP-207ENST00000604926 SMG6Q86US8 1419 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 KRIT1O00522 736 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 SPTLC1O15269 473 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 KCNQ2O43526 872 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 HSPA4LO95757 839 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 KRT1P04264 644 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 PDHA1P08559 390 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 LTA4HP09960 611 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 TARSP26639 723 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 MLH1P40692 756 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 TFAP4Q01664 338 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 RFTN1Q14699 578 aaPredicted RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 STK38Q15208 465 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 CFAP157Q5JU67 520 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 FCRLBQ6BAA4 426 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 C3orf67Q6ZVT6 689 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 PRR7Q8TB68 274 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 KCTD13Q8WZ19 329 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 PHF20Q9BVI0 1012 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 FAM129AQ9BZQ8 928 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 DRC3Q9H069 523 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 SDHAF3Q9NRP4 125 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZFATQ9P243 1243 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 TMEM5Q9Y2B1 443 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 SNX8Q9Y5X2 465 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 SEC31AO94979 1220 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 DDX58O95786 925 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 TRIM27P14373 513 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 POU2F1P14859 743 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 AKR1B1P15121 316 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 HPGDP15428 266 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 RPL9P32969 192 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 RPIAP49247 311 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 GPC3P51654 580 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 RARSP54136 660 aaKnown RBP6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 MPP1Q00013 466 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 AARDQ4LEZ3 155 aa6.31□□□□□ -1.4
COL4A3BP-207ENST00000604926 OTUD7BQ6GQQ9 843 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms