RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 IGFBP4P22692 258 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 TXKP42681 527 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 NLRP11P59045 1033 aaKnown RBP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 SPIRE1Q08AE8 756 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 KIZQ2M2Z5 673 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 TMEM266Q2M3C6 531 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 TTC38Q5R3I4 469 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 LRRC71Q8N4P6 559 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 LINC01465Q8N7H1 131 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 ERMNQ8TAM6 284 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 CEP170P1Q96L14 293 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 CCDC43Q96MW1 224 aaKnown RBP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 LXNQ9BS40 222 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 INO80BQ9C086 356 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 AGO3Q9H9G7 860 aaKnown RBP12.93□□□□□ -0.34
CCDC12-209ENST00000604164 CYP26B1Q9NR63 512 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 RWDD3Q9Y3V2 267 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 MICAL3Q7RTP6 2002 aa12.93□□□□□ -0.34
CCDC12-209ENST00000604164 IGKV6-21A0A0C4DH24 114 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 GPR32O75388 356 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 MAFO75444 373 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 STBD1O95210 358 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 LYPLA2O95372 231 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 OR52Z1P0C646 297 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 EIF4BP23588 611 aaKnown RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 YWHABP31946 246 aaKnown RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 POLGP54098 1239 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 ERVK-21P61565 698 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 ANO5Q75V66 913 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 TMCO2Q7Z6W1 182 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 ZNF410Q86VK4 478 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 NPAS4Q8IUM7 802 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 SLC17A8Q8NDX2 589 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 TCP11Q8WWU5 503 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 NLRP7Q8WX94 980 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 ARNTL2Q8WYA1 636 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 OSMRQ99650 979 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 EIF2AK1Q9BQI3 630 aaKnown RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 GCOM2Q9BZD3 368 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-209ENST00000604164 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 RAB34Q9BZG1 259 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 ERVK-5Q9HDB9 667 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 ST3GAL5Q9UNP4 418 aa12.92□□□□□ -0.34
CCDC12-209ENST00000604164 GBF1Q92538 1859 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 LINC01553A4QN01 128 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 LAD1O00515 517 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC12-209ENST00000604164 ZSCAN20P17040 1043 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-209ENST00000604164 POU3F3P20264 500 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-209ENST00000604164 GJB2P29033 226 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 SARSP49591 514 aaKnown RBP12.91□□□□□ -0.34
CCDC12-209ENST00000604164 GPC3P51654 580 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 ZNF174Q15697 407 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 HAUS3Q68CZ6 603 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 MCTP1Q6DN14 999 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 SLC24A5Q71RS6 500 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 DYDC2Q96IM9 177 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 HSD17B14Q9BPX1 270 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 ADAMTS10Q9H324 1103 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 TUFT1Q9NNX1 390 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 LMCD1Q9NZU5 365 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 SUCLA2Q9P2R7 463 aaPredicted RBP12.91□□□□□ -0.34
CCDC12-209ENST00000604164 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
CCDC12-209ENST00000604164 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
CCDC12-209ENST00000604164 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 LCHNA4D1U4 455 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 ASAP2O43150 1006 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 SLITRK3O94933 977 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 DARSP14868 501 aaKnown RBP12.9□□□□□ -0.34
CCDC12-209ENST00000604164 PDCP20941 246 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 MUTP22033 750 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 SFPQP23246 707 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC12-209ENST00000604164 CYP4A11Q02928 519 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
CCDC12-209ENST00000604164 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 XKR9Q5GH70 373 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 FIBCD1Q8N539 461 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 TMEM40Q8WWA1 233 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 PSPC1Q8WXF1 523 aaKnown RBP12.9□□□□□ -0.34
CCDC12-209ENST00000604164 CEP89Q96ST8 783 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 PPP1R16BQ96T49 567 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 ADAM2Q99965 735 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
CCDC12-209ENST00000604164 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 RGS18Q9NS28 235 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 DACT1Q9NYF0 836 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 RGL1Q9NZL6 768 aa12.9□□□□□ -0.34
CCDC12-209ENST00000604164 ADGRA3Q8IWK6 1321 aa12.89□□□□□ -0.35
CCDC12-209ENST00000604164 HOXA2O43364 376 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms