RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 APOBRQ0VD83 1088 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 MAP7Q14244 749 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 TIGD5Q53EQ6 642 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 TMEM199Q8N511 208 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 KIAA1958Q8N8K9 716 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 BICC1Q9H694 974 aaKnown RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 VTA1Q9NP79 307 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 INTS7Q9NVH2 962 aaKnown RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 MIS18AQ9NYP9 233 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 PI4KAP2A4QPH2 592 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 ADH1BP00325 375 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 ARAFP10398 606 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 MYCLP1P12525 358 aaPredicted RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 ICAM3P32942 547 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 CASP2P42575 452 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 TAP1Q03518 808 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 GRM2Q14416 872 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 INO80DQ53TQ3 878 aaPredicted RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 FAM102BQ5T8I3 360 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 RNF219Q5W0B1 726 aaPredicted RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 CXorf57Q6NSI4 855 aaKnown RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 PI16Q6UXB8 463 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 CHCHD4Q8N4Q1 142 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 PI4KAP1Q8N8J0 262 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 TEX19Q8NA77 164 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 C3orf58Q8NDZ4 430 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 MGARPQ8TDB4 240 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 APBB2Q92870 758 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 MRPL38Q96DV4 380 aaKnown RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 EDC3Q96F86 508 aaKnown RBP3.34□□□□□ -1.87
VCAM1-205ENST00000603679 GMCL1Q96IK5 515 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 CDH19Q9H159 772 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 SMC4Q9NTJ3 1288 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 HOXC10Q9NYD6 342 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 CTNNA3Q9UI47 895 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 TNNQ9UQP3 1299 aa3.34□□□□□ -1.87
VCAM1-205ENST00000603679 ABHD14A-ACY1A0A1B0GW23 586 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 CFAP69A5D8W1 941 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 H3BNC9 293 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 SMIM22K7EJ46 135 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 PLD2O14939 933 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 SNAI1O95863 264 aaPredicted RBP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 SCGB1D2O95969 90 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 LDHCP07864 332 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 UQCRFS1P1P0C7P4 283 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 SHMT1P34896 483 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 LIG3P49916 1009 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 GUCY2FP51841 1108 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 WDR43Q15061 677 aaKnown RBP eCLIP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 ZNF438Q7Z4V0 828 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 RNF180Q86T96 592 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 DGKHQ86XP1 1220 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 SMAP1Q8IYB5 467 aaPredicted RBP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 AFAP1L2Q8N4X5 818 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 C1orf131Q8NDD1 294 aaKnown RBP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 CMASQ8NFW8 434 aaPredicted RBP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 NUP133Q8WUM0 1156 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 MYLIPQ8WY64 445 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 ZKSCAN4Q969J2 545 aaPredicted RBP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 CHMP4CQ96CF2 233 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 PAGR1Q9BTK6 254 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 RUSC1Q9BVN2 902 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 BTBD7Q9P203 1132 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 NYAP2Q9P242 653 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 DKK4Q9UBT3 224 aa3.34□□□□□ -1.88
VCAM1-205ENST00000603679 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 TSR3Q9UJK0 312 aaKnown RBP3.34□□□□□ -1.88
VCAM1-205ENST00000603679 PNMA6EA0A0J9YXQ4 647 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 PRR23AA6NEV1 266 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 TTC36A6NLP5 189 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 COBLO75128 1261 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 IRS1P35568 1242 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 ACLYP53396 1101 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 JAG1P78504 1218 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 CAMK2GQ13555 558 aaPredicted RBP3.33□□□□□ -1.88
VCAM1-205ENST00000603679 IQSEC1Q6DN90 963 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 TAPT1Q6NXT6 567 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 UBALD2Q8IYN6 164 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 DPF3Q92784 378 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 TMOD2Q9NZR1 351 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 FOXD3Q9UJU5 478 aaPredicted RBP3.33□□□□□ -1.88
VCAM1-205ENST00000603679 NOB1Q9ULX3 412 aaKnown RBP3.33□□□□□ -1.88
VCAM1-205ENST00000603679 FAM50BQ9Y247 325 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 TDRD15B5MCY1 1934 aaKnown RBP3.33□□□□□ -1.88
VCAM1-205ENST00000603679 ANO9A1A5B4 782 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 PF4P02776 101 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 CA8P35219 290 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 CLCN5P51795 746 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 ZXDAP98168 799 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 SSRP1Q08945 709 aaKnown RBP3.33□□□□□ -1.88
VCAM1-205ENST00000603679 TRIM32Q13049 653 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 MPP2Q14168 576 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 CAVIN4Q5BKX8 364 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 ARMC3Q5W041 872 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 CNKSR3Q6P9H4 555 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 Q7L0L9 218 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 ADGRA1Q86SQ6 560 aa3.33□□□□□ -1.88
VCAM1-205ENST00000603679 LRRC47Q8N1G4 583 aaKnown RBP3.33□□□□□ -1.88
VCAM1-205ENST00000603679 TRIML1Q8N9V2 468 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms