RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 AP1B1Q10567 949 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SLC39A14Q15043 492 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 CCT7Q99832 543 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 TLR7Q9NYK1 1049 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 PALMO75781 387 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 AOC3Q16853 763 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 FOXP1Q9H334 677 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 C10orf88Q9H8K7 445 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 AKT3Q9Y243 479 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 FGGP02679 453 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 AFPP02771 609 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SERPINB1P30740 379 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 CHRNDQ07001 517 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 FAM160B1Q5W0V3 765 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SPDYE2BA6NHP3 402 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 MEIS1O00470 390 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SPDYE6P0CI01 402 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 CCND1P24385 295 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 TBL3Q12788 808 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 RARS2Q5T160 578 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ALG13Q9NP73 1137 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 LRRIQ3A6PVS8 624 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ERVV-2B6SEH9 535 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 MAFGO15525 162 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 NPR1P16066 1061 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ALDH18A1P54886 795 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 DOK7Q18PE1 504 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 DNAAF3Q8N9W5 541 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ADA2Q9NZK5 511 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 PCDHA4Q9UN74 947 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SNX24Q9Y343 169 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SNX5Q9Y5X3 404 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 QRICH2Q9H0J4 1663 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 LAD1O00515 517 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 TLR3O15455 904 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ALDH1B1P30837 517 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 USP14P54578 494 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 CEP78Q5JTW2 689 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 RYBPQ8N488 228 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 CLMNQ96JQ2 1002 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ZFYVE19Q96K21 471 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 FAM200BP0CF97 657 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 HABP4Q5JVS0 413 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 APOA5Q6Q788 366 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 P2RX5Q93086 422 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 SEC16BQ96JE7 1060 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 CALN1Q9BXU9 219 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 TSC22D2O75157 780 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 IQCB1Q15051 598 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 PSPC1Q8WXF1 523 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 RIN2Q8WYP3 895 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 GOLGA8QA0A0J9YX86 632 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 GOLGA8OA6NCC3 632 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 GOLGA8NF8WBI6 632 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 NANOGNBQ7Z5D8 188 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 CCDC103Q8IW40 242 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 ATP6V1E2Q96A05 226 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 GREM2Q9H772 168 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 MAP2P11137 1827 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 ENO1P06733 434 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 PLD3Q8IV08 490 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 CCNYQ8ND76 341 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 TRIM15Q9C019 465 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 SNX25Q9H3E2 840 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 RASA4BC9J798 803 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 CLIC2O15247 247 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 RASA4O43374 803 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 KRT4P19013 534 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 DARS2Q6PI48 645 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 TLK2Q86UE8 772 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 NCAPG2Q86XI2 1143 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 GALNT4Q8N4A0 578 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 TRIM11Q96F44 468 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 PBKQ96KB5 322 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 SAYSD1Q9NPB0 183 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 UBE2TQ9NPD8 197 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 PRAMEP78395 509 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 PROSER3Q2NL68 480 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 DNAJC24Q6P3W2 148 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 PGBD1Q96JS3 809 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 NOC2LQ9Y3T9 749 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 GOLGA8CPA6NN73 597 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 DEAF1O75398 565 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 PLCG1P19174 1290 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 NR5A1Q13285 461 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 UNC5CLQ8IV45 518 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 ZNF577Q9BSK1 485 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 LAMC1P11047 1609 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 MYH6P13533 1939 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 ZCCHC18P0CG32 403 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 NMD3Q96D46 503 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 ADNPQ9H2P0 1102 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 CAB39Q9Y376 341 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
CSMD1-216ENST00000602557 VCPP55072 806 aaKnown RBP9.29□□□□□ -0.92
CSMD1-216ENST00000602557 MRPS35P82673 323 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms