RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 LRRC43Q8N309 656 aa16.21■□□□□ 0.19
HCG18-245ENST00000602550 MRPL43Q8N983 215 aaKnown RBP16.21■□□□□ 0.19
HCG18-245ENST00000602550 TMEM40Q8WWA1 233 aa16.21■□□□□ 0.19
HCG18-245ENST00000602550 USTQ9Y2C2 406 aa16.21■□□□□ 0.19
HCG18-245ENST00000602550 COL1A2P08123 1366 aa16.21■□□□□ 0.19
HCG18-245ENST00000602550 NUCB1Q02818 461 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 UBE2SQ16763 222 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 ATAT1Q5SQI0 421 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 SRBD1Q8N5C6 995 aaKnown RBP16.2■□□□□ 0.18
HCG18-245ENST00000602550 TDRD5Q8NAT2 981 aaKnown RBP16.2■□□□□ 0.18
HCG18-245ENST00000602550 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 CASD1Q96PB1 797 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 MTA3Q9BTC8 594 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 IL25Q9H293 177 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 LIMD1Q9UGP4 676 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 ZNF292O60281 2723 aa16.2■□□□□ 0.18
HCG18-245ENST00000602550 MYH9P35579 1960 aaKnown RBP16.2■□□□□ 0.18
HCG18-245ENST00000602550 DMDP11532 3685 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 IGKV6D-21A0A0A0MT36 114 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 C2orf71A6NGG8 1288 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 BACH1O14867 736 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
HCG18-245ENST00000602550 DSC3Q14574 896 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 LRRC55Q6ZSA7 311 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 FAM228AQ86W67 206 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 TEX2Q8IWB9 1127 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 TMEM87AQ8NBN3 555 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 OSMRQ99650 979 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 MYL10Q9BUA6 226 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 DZANK1Q9NVP4 752 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 CDH22Q9UJ99 828 aa16.19■□□□□ 0.18
HCG18-245ENST00000602550 DBR1Q9UK59 544 aaKnown RBP16.19■□□□□ 0.18
HCG18-245ENST00000602550 CLASP2O75122 1294 aaKnown RBP16.18■□□□□ 0.18
HCG18-245ENST00000602550 FOSP01100 380 aaPredicted RBP16.18■□□□□ 0.18
HCG18-245ENST00000602550 ASGR2P07307 311 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 ARP10275 920 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 ANTXR2P58335 489 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 KIZQ2M2Z5 673 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 KIAA1841Q6NSI8 718 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 CASC1Q6TDU7 716 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 ZNF710Q8N1W2 664 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 CYP2W1Q8TAV3 490 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 RTP3Q9BQQ7 232 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 LY9Q9HBG7 655 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 AGO4Q9HCK5 861 aaKnown RBP16.18■□□□□ 0.18
HCG18-245ENST00000602550 CYP26B1Q9NR63 512 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 WDR87Q6ZQQ6 2873 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 VPS13AQ96RL7 3174 aa16.18■□□□□ 0.18
HCG18-245ENST00000602550 PLEKHA8P1O95397 391 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 CALM1P0DP23 149 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 CALM2P0DP24 149 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 CALM3P0DP25 149 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 AOC1P19801 751 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 CA8P35219 290 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 ITGB3BPQ13352 177 aaPredicted RBP16.17■□□□□ 0.18
HCG18-245ENST00000602550 GIT2Q14161 759 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 RARS2Q5T160 578 aaKnown RBP16.17■□□□□ 0.18
HCG18-245ENST00000602550 PDXDC2PQ6P474 469 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 ABHD15Q6UXT9 468 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 MB21D2Q8IYB1 491 aaPredicted RBP16.17■□□□□ 0.18
HCG18-245ENST00000602550 SLC39A11Q8N1S5 342 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 FLCNQ8NFG4 579 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 ACSF2Q96CM8 615 aaPredicted RBP16.17■□□□□ 0.18
HCG18-245ENST00000602550 SEMA4AQ9H3S1 761 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 SMOC2Q9H3U7 446 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 CACNA1BQ00975 2339 aa16.17■□□□□ 0.18
HCG18-245ENST00000602550 CARNS1A5YM72 827 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 CCDC69A6NI79 296 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 MEIS1O00470 390 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 GPR32O75388 356 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 CXCL14O95715 111 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 EOMESO95936 686 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 PBX3P40426 434 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 ALDH7A1P49419 539 aaKnown RBP16.16■□□□□ 0.18
HCG18-245ENST00000602550 PTH1RQ03431 593 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 CMTR1Q8N1G2 835 aaKnown RBP16.16■□□□□ 0.18
HCG18-245ENST00000602550 METTL13Q8N6R0 699 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
HCG18-245ENST00000602550 TMEM169Q96HH4 297 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 PPP1R16BQ96T49 567 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 MRPL9Q9BYD2 267 aaKnown RBP16.16■□□□□ 0.18
HCG18-245ENST00000602550 RNF19AQ9NV58 838 aa16.16■□□□□ 0.18
HCG18-245ENST00000602550 DCHS1Q96JQ0 3298 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 VTNP04004 478 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 WEE2P0C1S8 567 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 ANGPT1Q15389 498 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 SWSAP1Q6NVH7 229 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 HEATR3Q7Z4Q2 680 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 ECHDC2Q86YB7 292 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 CCDC60Q8IWA6 550 aaPredicted RBP16.15■□□□□ 0.18
HCG18-245ENST00000602550 CKAP2LQ8IYA6 745 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 CCDC105Q8IYK2 499 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 IRAK3Q9Y616 596 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
HCG18-245ENST00000602550 TPRP12270 2363 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms