RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 SUGCTQ9HAC7 445 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 SLC28A3Q9HAS3 691 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 CYP26B1Q9NR63 512 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 PADI3Q9ULW8 664 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 AKT3Q9Y243 479 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 PCDHB6Q9Y5E3 794 aa18.74■□□□□ 0.59
SSBP4-213ENST00000602088 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.73■□□□□ 0.59
SSBP4-213ENST00000602088 ZBTB39O15060 712 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 LYPLA2O95372 231 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 GJB5O95377 273 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 AMHP03971 560 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 YWHABP31946 246 aaKnown RBP18.73■□□□□ 0.59
SSBP4-213ENST00000602088 TECP42680 631 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 CRYBB1P53674 252 aaPredicted RBP18.73■□□□□ 0.59
SSBP4-213ENST00000602088 NPEPPSP55786 919 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 RILPL1Q5EBL4 403 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 OTUD6AQ7L8S5 288 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 ZNF710Q8N1W2 664 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 ZNF579Q8NAF0 562 aaKnown RBP18.73■□□□□ 0.59
SSBP4-213ENST00000602088 NEK9Q8TD19 979 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 GUCD1Q96NT3 240 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 GINS2Q9Y248 185 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 PPME1Q9Y570 386 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 CDH23Q9H251 3354 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 COL6A3P12111 3177 aa18.73■□□□□ 0.59
SSBP4-213ENST00000602088 TLL1O43897 1013 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 NLRP11P59045 1033 aaKnown RBP18.72■□□□□ 0.59
SSBP4-213ENST00000602088 PTGDRQ13258 359 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 TMEM40Q8WWA1 233 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 CEP170P1Q96L14 293 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 PPP1R16BQ96T49 567 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 ZBED2Q9BTP6 218 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 ADAMTS10Q9H324 1103 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.72■□□□□ 0.59
SSBP4-213ENST00000602088 NOC2LQ9Y3T9 749 aaKnown RBP18.72■□□□□ 0.59
SSBP4-213ENST00000602088 TRANK1O15050 2925 aa18.72■□□□□ 0.59
SSBP4-213ENST00000602088 ENPP3O14638 875 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 RPS6KA5O75582 802 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 CA3P07451 260 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 PDCP20941 246 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 DNM2P50570 870 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 PAK2Q13177 524 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 DRP2Q13474 957 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 EXOC8Q8IYI6 725 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 MYOCDQ8IZQ8 938 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 TOP1MTQ969P6 601 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 CDX2Q99626 313 aaPredicted RBP18.71■□□□□ 0.59
SSBP4-213ENST00000602088 RAD9AQ99638 391 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 OSMRQ99650 979 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 JPH2Q9BR39 696 aaPredicted RBP18.71■□□□□ 0.59
SSBP4-213ENST00000602088 FTHL17Q9BXU8 183 aa18.71■□□□□ 0.59
SSBP4-213ENST00000602088 LAD1O00515 517 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 SPATA31C1P0DKV0 1188 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 FXR2P51116 673 aaKnown RBP eCLIP18.7■□□□□ 0.58
SSBP4-213ENST00000602088 GPC3P51654 580 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 GRIN2CQ14957 1233 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 TMEM266Q2M3C6 531 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 XKR9Q5GH70 373 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 PPP2R2DQ66LE6 453 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 FAM117BQ6P1L5 589 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 FAM43BQ6ZT52 329 aaPredicted RBP18.7■□□□□ 0.58
SSBP4-213ENST00000602088 RTN4RL1Q86UN2 441 aaPredicted RBP18.7■□□□□ 0.58
SSBP4-213ENST00000602088 LINC01599Q8WXQ3 324 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 POLR3CQ9BUI4 534 aaPredicted RBP18.7■□□□□ 0.58
SSBP4-213ENST00000602088 DHX33Q9H6R0 707 aaKnown RBP18.7■□□□□ 0.58
SSBP4-213ENST00000602088 ERVK-5Q9HDB9 667 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 ANKEF1Q9NU02 776 aa18.7■□□□□ 0.58
SSBP4-213ENST00000602088 MED24O75448 989 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 RFC5P40937 340 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 PRPHP41219 470 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 HTRA4P83105 476 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-213ENST00000602088 CDC42EP1Q00587 391 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 NFX1Q12986 1120 aaKnown RBP18.69■□□□□ 0.58
SSBP4-213ENST00000602088 PDIA5Q14554 519 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 ODR4Q5SWX8 454 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 FAM228AQ86W67 206 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 CATSPER3Q86XQ3 398 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 SLC7A3Q8WY07 619 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 TMX1Q9H3N1 280 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 TUFT1Q9NNX1 390 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 SUCLA2Q9P2R7 463 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-213ENST00000602088 ST3GAL5Q9UNP4 418 aa18.69■□□□□ 0.58
SSBP4-213ENST00000602088 LCHNA4D1U4 455 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 VPS37CA5D8V6 355 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-213ENST00000602088 GPR182O15218 404 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 ARHGEF15O94989 841 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 UPP2O95045 317 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 XRCC6P12956 609 aaKnown RBP eCLIP18.68■□□□□ 0.58
SSBP4-213ENST00000602088 SYT1P21579 422 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 EIF4BP23588 611 aaKnown RBP18.68■□□□□ 0.58
SSBP4-213ENST00000602088 RPA1P27694 616 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 POLGP54098 1239 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-213ENST00000602088 TAP1Q03518 808 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 BRAPQ7Z569 592 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 IGSF22Q8N9C0 903 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 ERMNQ8TAM6 284 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 PIGOQ8TEQ8 1089 aa18.68■□□□□ 0.58
SSBP4-213ENST00000602088 ZNF668Q96K58 619 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-213ENST00000602088 TSPYL2Q9H2G4 693 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-213ENST00000602088 FOXD4L1Q9NU39 408 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms