RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	PLXNA4	Q9HCM2	1894 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	PRR33	A8MZF0	331 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	GPR182	O15218	404 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	DCX	O43602	365 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	ZNF862	O60290	1169 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	ALAD	P13716	330 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	CIITA	P33076	1130 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	NRIP1	P48552	1158 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	SMAD4	Q13485	552 aa	Known RBP	11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	UGCG	Q16739	394 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	MCTP2	Q6DN12	878 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	SLC24A5	Q71RS6	500 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	LRRC71	Q8N4P6	559 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	GJA10	Q969M2	543 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	ZNF668	Q96K58	619 aa	Predicted RBP	11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	MSLNL	Q96KJ4	702 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	RNF26	Q9BY78	433 aa	Predicted RBP	11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	AGXT2	Q9BYV1	514 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	C1orf112	Q9NSG2	853 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	CLEC1B	Q9P126	229 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	AKT3	Q9Y243	479 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	EVPL	Q92817	2033 aa		11.92	□□□□□ -0.5
LSM4-205	ENST00000597776	WDR64	B1ANS9	1081 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	MSH4	O15457	936 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	CHMP2A	O43633	222 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	GLP2R	O95838	553 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	IFNAR1	P17181	557 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	PDIA3	P30101	505 aa	Known RBP	11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	NLRP11	P59045	1033 aa	Known RBP	11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	RBM10	P98175	930 aa	Known RBP	11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	PRKCE	Q02156	737 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	DSC3	Q14574	896 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	ODR4	Q5SWX8	454 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	EFCAB12	Q6NXP0	572 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	FBXL16	Q8N461	479 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	EFHB	Q8N7U6	833 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	CCDC148	Q8NFR7	591 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	BICD2	Q8TD16	824 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	PPP2R3C	Q969Q6	453 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	CCDC136	Q96JN2	1154 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	UNC45A	Q9H3U1	944 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	ATP6V0A4	Q9HBG4	840 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	TYW1	Q9NV66	732 aa	Known RBP	11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	MUTYH	Q9UIF7	546 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	PCDHB12	Q9Y5F1	795 aa		11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.91	□□□□□ -0.5
LSM4-205	ENST00000597776	PER2	O15055	1255 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	GAS7	O60861	476 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	FGF18	O76093	207 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	OAT	P04181	439 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	NLRP5	P59047	1200 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	CSPP1	Q1MSJ5	1256 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	THNSL1	Q8IYQ7	743 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	LINC01465	Q8N7H1	131 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	COLGALT1	Q8NBJ5	622 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	SMRP1	Q8NCR6	262 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	VN1R2	Q8NFZ6	395 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	MICAL1	Q8TDZ2	1067 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	FAM167A	Q96KS9	214 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	MAP7D2	Q96T17	732 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	POP1	Q99575	1024 aa	Known RBP	11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	LARP6	Q9BRS8	491 aa	Known RBP	11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	ADAMTS10	Q9H324	1103 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	CWH43	Q9H720	699 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	TLE6	Q9H808	572 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	DISC1	Q9NRI5	854 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	RNF19A	Q9NV58	838 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	TMEM161A	Q9NX61	479 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	CEP131	Q9UPN4	1083 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	WDFY4	Q6ZS81	3184 aa		11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	MYH9	P35579	1960 aa	Known RBP	11.9	□□□□□ -0.5
LSM4-205	ENST00000597776	TMEM150B	A6NC51	233 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	MAGEB2	O15479	319 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	REC8	O95072	547 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	EYA4	O95677	639 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	FGFR4	P22455	802 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	PSMA5	P28066	241 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	PBX3	P40426	434 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	EVC	P57679	992 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	ERVFC1	P60507	584 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	FAM189B	P81408	668 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	TOB2	Q14106	344 aa	Predicted RBP	11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	LRCH2	Q5VUJ6	765 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	RNF135	Q8IUD6	432 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	RNF169	Q8NCN4	708 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	TBCK	Q8TEA7	893 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	SLC5A5	Q92911	643 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	SCLT1	Q96NL6	688 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	UPF3B	Q9BZI7	483 aa	Known RBP	11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	TLR9	Q9NR96	1032 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	AAAS	Q9NRG9	546 aa		11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	RNF216	Q9NWF9	866 aa	Predicted RBP	11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	USP15	Q9Y4E8	981 aa	Predicted RBP	11.89	□□□□□ -0.51
LSM4-205	ENST00000597776	CSDE1	O75534	798 aa	Known RBP	11.88	□□□□□ -0.51
LSM4-205	ENST00000597776	TDP2	O95551	362 aa		11.88	□□□□□ -0.51
LSM4-205	ENST00000597776	LAG3	P18627	525 aa		11.88	□□□□□ -0.51
LSM4-205	ENST00000597776	EIF4B	P23588	611 aa	Known RBP	11.88	□□□□□ -0.51
LSM4-205	ENST00000597776	TMOD1	P28289	359 aa		11.88	□□□□□ -0.51

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