RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 RMDN1Q96DB5 314 aa12.48□□□□□ -0.41
ZNF548-207ENST00000597400 RRP36Q96EU6 259 aaKnown RBP12.48□□□□□ -0.41
ZNF548-207ENST00000597400 PGBD1Q96JS3 809 aa12.48□□□□□ -0.41
ZNF548-207ENST00000597400 AZI2Q9H6S1 392 aa12.48□□□□□ -0.41
ZNF548-207ENST00000597400 ATP6V0A4Q9HBG4 840 aa12.48□□□□□ -0.41
ZNF548-207ENST00000597400 NGRNQ9NPE2 291 aaKnown RBP12.48□□□□□ -0.41
ZNF548-207ENST00000597400 LIMD1Q9UGP4 676 aa12.48□□□□□ -0.41
ZNF548-207ENST00000597400 PATJQ8NI35 1801 aa12.48□□□□□ -0.41
ZNF548-207ENST00000597400 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
ZNF548-207ENST00000597400 NFASCO94856 1347 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 E7EWF7 191 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 ATG7O95352 703 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 RXRAP19793 462 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 AOC1P19801 751 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 ATP4AP20648 1035 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 ITIH3Q06033 890 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 ANGPT1Q15389 498 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 CLLU1OSQ5K130 101 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 DIEXFQ68CQ4 756 aaKnown RBP12.47□□□□□ -0.41
ZNF548-207ENST00000597400 KIAA1841Q6NSI8 718 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 TMC7Q7Z402 723 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-207ENST00000597400 MB21D2Q8IYB1 491 aaPredicted RBP12.47□□□□□ -0.41
ZNF548-207ENST00000597400 CCDC105Q8IYK2 499 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 ZDHHC14Q8IZN3 488 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 SLC39A11Q8N1S5 342 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
ZNF548-207ENST00000597400 TDRD5Q8NAT2 981 aaKnown RBP12.47□□□□□ -0.41
ZNF548-207ENST00000597400 AUTS2Q8WXX7 1259 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 NECTIN4Q96NY8 510 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 MFSD1Q9H3U5 465 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 ELAC1Q9H777 363 aaKnown RBP12.47□□□□□ -0.41
ZNF548-207ENST00000597400 PSTPIP2Q9H939 334 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 LY9Q9HBG7 655 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 PCDHA6Q9UN73 950 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 PCDHA8Q9Y5H6 950 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
ZNF548-207ENST00000597400 NT5C1B-RDH14C9J2C7 533 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 HIP1O00291 1037 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 GPR32O75388 356 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 C22orf31O95567 290 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 VTNP04004 478 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 EPCAMP16422 314 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 TRDNQ13061 729 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 SMC1AQ14683 1233 aaKnown RBP12.46□□□□□ -0.41
ZNF548-207ENST00000597400 CES5AQ6NT32 575 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 CATIPQ7Z7H3 387 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 LRRC43Q8N309 656 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 ZNF558Q96NG5 402 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 MXRA8Q9BRK3 442 aa12.46□□□□□ -0.41
ZNF548-207ENST00000597400 AGO4Q9HCK5 861 aaKnown RBP12.46□□□□□ -0.41
ZNF548-207ENST00000597400 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
ZNF548-207ENST00000597400 PUF60Q9UHX1 559 aaKnown RBP12.46□□□□□ -0.41
ZNF548-207ENST00000597400 COL1A2P08123 1366 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 ERICH2A1L162 156 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 SPDYE3A6NKU9 549 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 DDX39AO00148 427 aaKnown RBP12.45□□□□□ -0.42
ZNF548-207ENST00000597400 GPR182O15218 404 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 MAFGO15525 162 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 EOMESO95936 686 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 MTHFRP42898 656 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 ABHD15Q6UXT9 468 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 BCL7CQ8WUZ0 217 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-207ENST00000597400 MAP3K14Q99558 947 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 ZBP1Q9H171 429 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 CACNA1IQ9P0X4 2223 aa12.45□□□□□ -0.42
ZNF548-207ENST00000597400 SPTBN2O15020 2390 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 TPRP12270 2363 aaKnown RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 DOCK6Q96HP0 2047 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 NARSO43776 548 aaKnown RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 HBP1O60381 514 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 DDAH1O94760 285 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 IGHDP01880 384 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 GSPT1P15170 499 aaKnown RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 PPM1AP35813 382 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 CRYBB1P53674 252 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 NUCB1Q02818 461 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 ECHDC2Q86YB7 292 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 DTWD2Q8NBA8 298 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 NCOA7Q8NI08 942 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 CTCFLQ8NI51 663 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 SLC22A17Q8WUG5 538 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 DBR1Q9UK59 544 aaKnown RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 USTQ9Y2C2 406 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 R4GN57 208 aa12.44□□□□□ -0.42
ZNF548-207ENST00000597400 MTCL1Q9Y4B5 1905 aaKnown RBP12.44□□□□□ -0.42
ZNF548-207ENST00000597400 GPR179Q6PRD1 2367 aa12.43□□□□□ -0.42
ZNF548-207ENST00000597400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms