RNA–Protein interactions for RNA: ENST00000597088.1

PRKD2-207, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-207ENST00000597088 KDM3AQ9Y4C1 1321 aa27.1■■□□□ 1.93
PRKD2-207ENST00000597088 MICAL3Q7RTP6 2002 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 A0A087WWV3 80 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 IGKV6-21A0A0C4DH24 114 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 BMP15O95972 392 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 MKRN4PQ13434 485 aaPredicted RBP27.09■■□□□ 1.93
PRKD2-207ENST00000597088 KIZQ2M2Z5 673 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 FOXD4L5Q5VV16 416 aaPredicted RBP27.09■■□□□ 1.93
PRKD2-207ENST00000597088 ARL6IP4Q66PJ3 421 aaKnown RBP27.09■■□□□ 1.93
PRKD2-207ENST00000597088 PIGOQ8TEQ8 1089 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 FOXD4L4Q8WXT5 416 aaPredicted RBP27.09■■□□□ 1.93
PRKD2-207ENST00000597088 LRCH3Q96II8 777 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 IFIH1Q9BYX4 1025 aaKnown RBP27.09■■□□□ 1.93
PRKD2-207ENST00000597088 ANKEF1Q9NU02 776 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 PPME1Q9Y570 386 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 CLIC4Q9Y696 253 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 PTPRSQ13332 1948 aa27.09■■□□□ 1.93
PRKD2-207ENST00000597088 VWA3AA6NCI4 1184 aa27.08■■□□□ 1.93
PRKD2-207ENST00000597088 CCT6AP40227 531 aaKnown RBP27.08■■□□□ 1.93
PRKD2-207ENST00000597088 RFC5P40937 340 aa27.08■■□□□ 1.93
PRKD2-207ENST00000597088 POLGP54098 1239 aaPredicted RBP27.08■■□□□ 1.93
PRKD2-207ENST00000597088 BECN1Q14457 450 aa27.08■■□□□ 1.93
PRKD2-207ENST00000597088 TSHZ1Q6ZSZ6 1077 aa27.08■■□□□ 1.93
PRKD2-207ENST00000597088 SNX29Q8TEQ0 813 aa27.08■■□□□ 1.93
PRKD2-207ENST00000597088 SLC7A3Q8WY07 619 aa27.08■■□□□ 1.93
PRKD2-207ENST00000597088 DHX33Q9H6R0 707 aaKnown RBP27.08■■□□□ 1.93
PRKD2-207ENST00000597088 CDHR5Q9HBB8 845 aa27.08■■□□□ 1.93
PRKD2-207ENST00000597088 BMP2KQ9NSY1 1161 aaPredicted RBP27.08■■□□□ 1.93
PRKD2-207ENST00000597088 GBF1Q92538 1859 aa27.07■■□□□ 1.92
PRKD2-207ENST00000597088 ZSCAN22P10073 491 aaPredicted RBP27.07■■□□□ 1.92
PRKD2-207ENST00000597088 WDR5P61964 334 aaKnown RBP27.07■■□□□ 1.92
PRKD2-207ENST00000597088 PKP1Q13835 747 aa27.07■■□□□ 1.92
PRKD2-207ENST00000597088 IKBKEQ14164 716 aa27.07■■□□□ 1.92
PRKD2-207ENST00000597088 CCDC43Q96MW1 224 aaKnown RBP27.07■■□□□ 1.92
PRKD2-207ENST00000597088 JPH2Q9BR39 696 aaPredicted RBP27.07■■□□□ 1.92
PRKD2-207ENST00000597088 AGO3Q9H9G7 860 aaKnown RBP27.07■■□□□ 1.92
PRKD2-207ENST00000597088 ABHD14A-ACY1A0A1B0GW23 586 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 GRXCR1A8MXD5 290 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 GPR32O75388 356 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 PDIA4P13667 645 aaKnown RBP27.06■■□□□ 1.92
PRKD2-207ENST00000597088 CDC25AP30304 524 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 RARRES1P49788 294 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 DNM2P50570 870 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 EMC2Q15006 297 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 ECM1Q16610 540 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 TMEM40Q8WWA1 233 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 OSMRQ99650 979 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 STK24Q9Y6E0 443 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 SQORQ9Y6N5 450 aa27.06■■□□□ 1.92
PRKD2-207ENST00000597088 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 XRCC6P12956 609 aaKnown RBP eCLIP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 CD52P31358 61 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 CRYBB1P53674 252 aaPredicted RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 NLRP11P59045 1033 aaKnown RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 SMAD3P84022 425 aaKnown RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 CEBPZQ03701 1054 aaKnown RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 PTPAQ15257 358 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 KRT79Q5XKE5 535 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 EXOC8Q8IYI6 725 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 USP38Q8NB14 1042 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 APBB2Q92870 758 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 ZNF668Q96K58 619 aaPredicted RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 NACC1Q96RE7 527 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 ADAMTS10Q9H324 1103 aa27.05■■□□□ 1.92
PRKD2-207ENST00000597088 SUCLA2Q9P2R7 463 aaPredicted RBP27.05■■□□□ 1.92
PRKD2-207ENST00000597088 EFCAB14O75071 495 aa27.04■■□□□ 1.92
PRKD2-207ENST00000597088 ATP2A2P16615 1042 aaKnown RBP27.04■■□□□ 1.92
PRKD2-207ENST00000597088 MUTP22033 750 aa27.04■■□□□ 1.92
PRKD2-207ENST00000597088 KCNJ6P48051 423 aa27.04■■□□□ 1.92
PRKD2-207ENST00000597088 GPC3P51654 580 aa27.04■■□□□ 1.92
PRKD2-207ENST00000597088 USP28Q96RU2 1077 aa27.04■■□□□ 1.92
PRKD2-207ENST00000597088 MMTAG2Q9BU76 263 aaKnown RBP27.04■■□□□ 1.92
PRKD2-207ENST00000597088 DBR1Q9UK59 544 aaKnown RBP27.04■■□□□ 1.92
PRKD2-207ENST00000597088 F13A1P00488 732 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 DEFB103AP81534 67 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 PAK2Q13177 524 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 TMEM143Q96AN5 459 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 SCLT1Q96NL6 688 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 SLC9A7Q96T83 725 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 DDX19AQ9NUU7 478 aaKnown RBP27.03■■□□□ 1.92
PRKD2-207ENST00000597088 PADI3Q9ULW8 664 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 KIAA1024Q9UPX6 916 aa27.03■■□□□ 1.92
PRKD2-207ENST00000597088 NOC2LQ9Y3T9 749 aaKnown RBP27.03■■□□□ 1.92
PRKD2-207ENST00000597088 GAS2O43903 313 aaKnown RBP27.02■■□□□ 1.92
PRKD2-207ENST00000597088 GRIN1Q05586 938 aa27.02■■□□□ 1.92
PRKD2-207ENST00000597088 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.02■■□□□ 1.92
PRKD2-207ENST00000597088 RHPN2Q8IUC4 686 aa27.02■■□□□ 1.92
PRKD2-207ENST00000597088 ZNF710Q8N1W2 664 aa27.02■■□□□ 1.92
PRKD2-207ENST00000597088 NLRP7Q8WX94 980 aa27.02■■□□□ 1.92
PRKD2-207ENST00000597088 MTRQ99707 1265 aa27.02■■□□□ 1.92
PRKD2-207ENST00000597088 ATP6V0A4Q9HBG4 840 aa27.02■■□□□ 1.92
PRKD2-207ENST00000597088 XPNPEP1Q9NQW7 623 aa27.02■■□□□ 1.92
PRKD2-207ENST00000597088 USO1O60763 962 aaKnown RBP27.01■■□□□ 1.91
PRKD2-207ENST00000597088 RPS6KA5O75582 802 aa27.01■■□□□ 1.91
PRKD2-207ENST00000597088 DGAT1O75907 488 aa27.01■■□□□ 1.91
PRKD2-207ENST00000597088 PBX2P40425 430 aa27.01■■□□□ 1.91
PRKD2-207ENST00000597088 TMCO2Q7Z6W1 182 aaPredicted RBP27.01■■□□□ 1.91
PRKD2-207ENST00000597088 KSR1Q8IVT5 923 aa27.01■■□□□ 1.91
PRKD2-207ENST00000597088 PSPC1Q8WXF1 523 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms