RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 CRYBB1P53674 252 aaPredicted RBP16.57■□□□□ 0.24
USE1-205ENST00000594724 NLRP11P59045 1033 aaKnown RBP16.57■□□□□ 0.24
USE1-205ENST00000594724 SPIRE1Q08AE8 756 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 EPHA7Q15375 998 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 CALCRLQ16602 461 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 FBXO18Q8NFZ0 1043 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 DYDC2Q96IM9 177 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 TGS1Q96RS0 853 aaKnown RBP16.57■□□□□ 0.24
USE1-205ENST00000594724 MAP7D2Q96T17 732 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 RGL1Q9NZL6 768 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 WRAP73Q9P2S5 460 aaPredicted RBP16.57■□□□□ 0.24
USE1-205ENST00000594724 NEMFO60524 1076 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 IBSPP21815 317 aaPredicted RBP16.56■□□□□ 0.24
USE1-205ENST00000594724 MCM7P33993 719 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 TXKP42681 527 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 ERVK-21P61565 698 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 DRP2Q13474 957 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 PLA2G4FQ68DD2 849 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 ANO5Q75V66 913 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.56■□□□□ 0.24
USE1-205ENST00000594724 ZNF579Q8NAF0 562 aaKnown RBP16.56■□□□□ 0.24
USE1-205ENST00000594724 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
USE1-205ENST00000594724 TMX3Q96JJ7 454 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 C17orf80Q9BSJ5 609 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 FTHL17Q9BXU8 183 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 TMEM60Q9H2L4 133 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 ADAMTS10Q9H324 1103 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 ERVK-5Q9HDB9 667 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 PCDHA12Q9UN75 941 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 ST3GAL5Q9UNP4 418 aa16.56■□□□□ 0.24
USE1-205ENST00000594724 LOXHD1Q8IVV2 1947 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 MGEA5O60502 916 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 LPXNO60711 386 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 NPEPPSP55786 919 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 CYP4A11Q02928 519 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 GRB10Q13322 594 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
USE1-205ENST00000594724 FAM228AQ86W67 206 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 GDPD5Q8WTR4 605 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 MTMR9Q96QG7 549 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 LXNQ9BS40 222 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 TSPYL2Q9H2G4 693 aaPredicted RBP16.55■□□□□ 0.24
USE1-205ENST00000594724 FOXP1Q9H334 677 aaPredicted RBP16.55■□□□□ 0.24
USE1-205ENST00000594724 TTC12Q9H892 705 aaPredicted RBP16.55■□□□□ 0.24
USE1-205ENST00000594724 PRDM6Q9NQX0 595 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 MYO9BQ13459 2157 aa16.55■□□□□ 0.24
USE1-205ENST00000594724 IGKV6-21A0A0C4DH24 114 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 ZBTB39O15060 712 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 GPR182O15218 404 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 DKC1O60832 514 aaKnown RBP eCLIP16.54■□□□□ 0.24
USE1-205ENST00000594724 MAFO75444 373 aaPredicted RBP16.54■□□□□ 0.24
USE1-205ENST00000594724 GPC3P51654 580 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
USE1-205ENST00000594724 ZNF174Q15697 407 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 TPH2Q8IWU9 490 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 ADAM2Q99965 735 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 CYP26B1Q9NR63 512 aa16.54■□□□□ 0.24
USE1-205ENST00000594724 PRUNE2Q8WUY3 3088 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 GTPBP6O43824 516 aaPredicted RBP16.53■□□□□ 0.24
USE1-205ENST00000594724 CSDE1O75534 798 aaKnown RBP16.53■□□□□ 0.24
USE1-205ENST00000594724 SLITRK3O94933 977 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
USE1-205ENST00000594724 DNM2P50570 870 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 ODR4Q5SWX8 454 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 NOSTRINQ8IVI9 506 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 C4orf19Q8IY42 314 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 CRIPAKQ8N1N5 446 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 FIBCD1Q8N539 461 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 FBXO22Q8NEZ5 403 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 CEP170P1Q96L14 293 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 SCLT1Q96NL6 688 aa16.53■□□□□ 0.24
USE1-205ENST00000594724 EIF2AK1Q9BQI3 630 aaKnown RBP16.53■□□□□ 0.24
USE1-205ENST00000594724 DENND3A2RUS2 1198 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 DGKIO75912 1065 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 FGFR4P22455 802 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 EIF4BP23588 611 aaKnown RBP16.52■□□□□ 0.24
USE1-205ENST00000594724 YWHABP31946 246 aaKnown RBP16.52■□□□□ 0.24
USE1-205ENST00000594724 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 NPAS4Q8IUM7 802 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 TMEM192Q8IY95 271 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 NLRP7Q8WX94 980 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
USE1-205ENST00000594724 BACH2Q9BYV9 841 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 ZSWIM4Q9H7M6 989 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 RC3H2Q9HBD1 1191 aaKnown RBP16.52■□□□□ 0.24
USE1-205ENST00000594724 BMP2KQ9NSY1 1161 aaPredicted RBP16.52■□□□□ 0.24
USE1-205ENST00000594724 SUCLA2Q9P2R7 463 aaPredicted RBP16.52■□□□□ 0.24
USE1-205ENST00000594724 LRFN2Q9ULH4 789 aa16.52■□□□□ 0.24
USE1-205ENST00000594724 A0A087WWV3 80 aa16.51■□□□□ 0.23
USE1-205ENST00000594724 POTEMA6NI47 508 aa16.51■□□□□ 0.23
USE1-205ENST00000594724 STAG3L1P0CL83 205 aa16.51■□□□□ 0.23
USE1-205ENST00000594724 GJB2P29033 226 aa16.51■□□□□ 0.23
USE1-205ENST00000594724 SARSP49591 514 aaKnown RBP16.51■□□□□ 0.23
USE1-205ENST00000594724 GATMP50440 423 aa16.51■□□□□ 0.23
USE1-205ENST00000594724 BTG3Q14201 252 aaPredicted RBP16.51■□□□□ 0.23
USE1-205ENST00000594724 NBR1Q14596 966 aa16.51■□□□□ 0.23
USE1-205ENST00000594724 XKR9Q5GH70 373 aa16.51■□□□□ 0.23
USE1-205ENST00000594724 TTC38Q5R3I4 469 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms