RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 NFS1Q9Y697 457 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 LCA5LO95447 670 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 TNFAIP3P21580 790 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 ECHS1P30084 290 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 CASP4P49662 377 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 LACTBP83111 547 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-242ENST00000593093 ITPK1Q13572 414 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 CAPRIN2Q6IMN6 1127 aaKnown RBP15.44■□□□□ 0.06
CIRBP-242ENST00000593093 FAM129AQ9BZQ8 928 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 BCAS3Q9H6U6 928 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 CCDC87Q9NVE4 849 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 PPP1R9AQ9ULJ8 1098 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 AGAP1Q9UPQ3 857 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 STAT1P42224 750 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 BYSLQ13895 437 aaKnown RBP15.44■□□□□ 0.06
CIRBP-242ENST00000593093 TBC1D10BQ4KMP7 808 aaPredicted RBP15.44■□□□□ 0.06
CIRBP-242ENST00000593093 AGBL2Q5U5Z8 902 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 SLC30A10Q6XR72 485 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 VSIG1Q86XK7 387 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 SH3GL3Q99963 347 aa15.44■□□□□ 0.06
CIRBP-242ENST00000593093 NOP53Q9NZM5 478 aaKnown RBP15.44■□□□□ 0.06
CIRBP-242ENST00000593093 MTRF1LQ9UGC7 380 aaKnown RBP15.44■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L15C9J2P7 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L13C9JLJ4 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L11C9JVI0 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L18D6R9N7 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L22D6RA61 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L17D6RBQ6 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L19D6RCP7 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L20D6RJB6 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 AFPP02771 609 aaKnown RBP15.43■□□□□ 0.06
CIRBP-242ENST00000593093 IL6STP40189 918 aaPredicted RBP15.43■□□□□ 0.06
CIRBP-242ENST00000593093 CYP2J2P51589 502 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 ALDH5A1P51649 535 aaPredicted RBP15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L24Q0WX57 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 TAF11Q15544 211 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 USP17L6PQ6QN14 398 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 SLC35G2Q8TBE7 412 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 SCFD2Q8WU76 684 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 CEP95Q96GE4 821 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 PPP1R12CQ9BZL4 782 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 CNOT10Q9H9A5 744 aaKnown RBP15.43■□□□□ 0.06
CIRBP-242ENST00000593093 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 SNAP25P60880 206 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 ATP11AP98196 1134 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 LRRC27Q9C0I9 530 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 PICK1Q9NRD5 415 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 CCDC188H7C350 402 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 BAG3O95817 575 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 CREB1P16220 341 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 GJC1P36383 396 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 CASP5P51878 434 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 WLSQ5T9L3 541 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 C12orf60Q5U649 245 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 ZNF449Q6P9G9 518 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 ERICH1Q86X53 443 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 ERVK-5Q9HDB9 667 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.43■□□□□ 0.06
CIRBP-242ENST00000593093 RASAL2Q9UJF2 1139 aa15.43■□□□□ 0.06
CIRBP-242ENST00000593093 CHMP2AO43633 222 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
CIRBP-242ENST00000593093 ERMARDQ5T6L9 678 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 MEX3CQ5U5Q3 659 aaKnown RBP15.42■□□□□ 0.06
CIRBP-242ENST00000593093 GALNT17Q6IS24 598 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 ZNF483Q8TF39 744 aaPredicted RBP15.42■□□□□ 0.06
CIRBP-242ENST00000593093 ASIC3Q9UHC3 531 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 COL18A1P39060 1754 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 RPS8P62241 208 aaKnown RBP15.42■□□□□ 0.06
CIRBP-242ENST00000593093 RNASELQ05823 741 aaKnown RBP15.42■□□□□ 0.06
CIRBP-242ENST00000593093 XRCC4Q13426 336 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 SFR1Q86XK3 245 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 EP400Q96L91 3159 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 STX2P32856 288 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 HP1BP3Q5SSJ5 553 aaPredicted RBP15.42■□□□□ 0.06
CIRBP-242ENST00000593093 KCTD1Q719H9 257 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 SYCE1Q8N0S2 351 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 SCFD1Q8WVM8 642 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 KDM4CQ9H3R0 1056 aa15.42■□□□□ 0.06
CIRBP-242ENST00000593093 INHBEP58166 350 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 KCNA1Q09470 495 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 TTBK2Q6IQ55 1244 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 TRIM59Q8IWR1 403 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 RPGRQ92834 1020 aaKnown RBP15.41■□□□□ 0.06
CIRBP-242ENST00000593093 ETNK1Q9HBU6 452 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 A0A1W2PRG0 241 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 ERVV-1B6SEH8 477 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 SPOPO43791 374 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 C21orf2O43822 256 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 TRIM49P0CI25 452 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 TRIM49CP0CI26 452 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 CALCOCO2Q13137 446 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 PRR16Q569H4 304 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 BARGINQ6ZT62 677 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 JAMLQ86YT9 394 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
CIRBP-242ENST00000593093 RBM46Q8TBY0 533 aaKnown RBP15.41■□□□□ 0.06
CIRBP-242ENST00000593093 ACTRT1Q8TDG2 376 aa15.41■□□□□ 0.06
CIRBP-242ENST00000593093 RNF25Q96BH1 459 aaPredicted RBP15.41■□□□□ 0.06
CIRBP-242ENST00000593093 ERP44Q9BS26 406 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms