RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MIER3Q7Z3K6 550 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 MCF2L2Q86YR7 1114 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 RBM46Q8TBY0 533 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 LRRC1Q9BTT6 524 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 HPCAL4Q9UM19 191 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 FRMD4BQ9Y2L6 1034 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 ZNF536O15090 1300 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 ATP8B3O60423 1300 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 CCDC66A2RUB6 948 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 DDX39AO00148 427 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 WNT10BO00744 389 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 WDR46O15213 610 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 N4BP1O75113 896 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 FTCDO95954 541 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 MEI1Q5TIA1 1274 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 NIPA1Q7RTP0 329 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 PRPF38AQ8NAV1 312 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 AGPAT3Q9NRZ7 376 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 SMARCAL1Q9NZC9 954 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 EHD2Q9NZN4 543 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 ADAM21Q9UKJ8 722 aa18.11■□□□□ 0.49
PRKCSH-217ENST00000592741 FERP16591 822 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 ITGB5P18084 799 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 AARSP49588 968 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 CXCL9Q07325 125 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 KSR1Q8IVT5 923 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 GSPT2Q8IYD1 628 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 LPAR1Q92633 364 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 SELENOOQ9BVL4 669 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 PDGFDQ9GZP0 370 aaPredicted RBP18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 IKZF4Q9H2S9 585 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 PSD3Q9NYI0 1048 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 NAGPAQ9UK23 515 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 AJAP1Q9UKB5 411 aaPredicted RBP18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 GRID2IPA4D2P6 1211 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 HIP1RO75146 1068 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 MYBL2P10244 700 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 GYS2P54840 703 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 COG2Q14746 738 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 GLE1Q53GS7 698 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 C8orf74Q6P047 294 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 MYOZ2Q9NPC6 264 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 DMAC2Q9NW81 257 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 COL20A1Q9P218 1284 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 FAN1Q9Y2M0 1017 aa18.1■□□□□ 0.49
PRKCSH-217ENST00000592741 NFIBO00712 420 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 STAT1P42224 750 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 FMO5P49326 533 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 CYP2J2P51589 502 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 PPP2R5AQ15172 486 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 ALKBH5Q6P6C2 394 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 SYCP3Q8IZU3 236 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 AENQ8WTP8 325 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 CLEC4DQ8WXI8 215 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 KCNH7Q9NS40 1196 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 PKD2L1Q9P0L9 805 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 MYH11P35749 1972 aa18.09■□□□□ 0.49
PRKCSH-217ENST00000592741 PHF20L1A8MW92 1017 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 P4HBP07237 508 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 GHRHRQ02643 423 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 CIAPIN1Q6FI81 312 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 GJB7Q6PEY0 223 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 PADI6Q6TGC4 694 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 HDAC7Q8WUI4 952 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 TAF4BQ92750 862 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 MS4A14Q96JA4 679 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 RBM12Q9NTZ6 932 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 STIM2Q9P246 746 aa18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 DMGDHQ9UI17 866 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-217ENST00000592741 DNA2P51530 1060 aa18.08■□□□□ 0.48
PRKCSH-217ENST00000592741 MAPK7Q13164 816 aa18.08■□□□□ 0.48
PRKCSH-217ENST00000592741 RASA3Q14644 834 aa18.08■□□□□ 0.48
PRKCSH-217ENST00000592741 PCNX4Q63HM2 1172 aa18.08■□□□□ 0.48
PRKCSH-217ENST00000592741 IL31RAQ8NI17 732 aa18.08■□□□□ 0.48
PRKCSH-217ENST00000592741 NENFQ9UMX5 172 aa18.08■□□□□ 0.48
PRKCSH-217ENST00000592741 K7ENM7 598 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 PPP1R37O75864 691 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 GFPT2O94808 682 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 ALAS1P13196 640 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 NOP2P46087 812 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 ALCAMQ13740 583 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 MYBPC2Q14324 1141 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 TKFCQ3LXA3 575 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 SLC9A9Q8IVB4 645 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 ZBTB9Q96C00 473 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 GDAP1L1Q96MZ0 367 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 STRA6Q9BX79 667 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 KIAA1683Q9H0B3 1180 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 AGO4Q9HCK5 861 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 DAAM1Q9Y4D1 1078 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 UBIAD1Q9Y5Z9 338 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 CES2O00748 559 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 EXOC3O60645 756 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 TNFRSF8P28908 595 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 SOX5P35711 763 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 SLC7A5Q01650 507 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 TNFAIP1Q13829 316 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 RPS6KA1Q15418 735 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 FMNL3Q8IVF7 1028 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms